| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1387 |
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| Symbol | hrpF |
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| ID | 1183023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1528246 |
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| End bp | 1528470 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392759 |
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| Product | type III secretion protein HrpF |
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| Protein accession | NP_791214 |
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| Protein GI | 28868595 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAGTT TCAACAGCTT GCAACGCCAT CTCGACAATT CGGTGAGCCG TGCTCACACC
AACATGGACC AGGCAGCGAT GGAAGCCTCC GAGAGTGGCA CCGTCGAAGA CCTGCAGGCA
TTCAACGATG CCCAGCAGCA GGTCGATGTC GCCGGTATTG CCGTCAATGA ATGCCTGCGT
GCCAAGCACG GTATCAATAA AGCAGTCATC GATGGAATTC AGTGA
|
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| Protein sequence | MISFNSLQRH LDNSVSRAHT NMDQAAMEAS ESGTVEDLQA FNDAQQQVDV AGIAVNECLR
AKHGINKAVI DGIQ
|
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