| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1363 |
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| Symbol | |
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| ID | 1182999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1500812 |
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| End bp | 1502233 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392735 |
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| Product | sugar transporter family protein |
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| Protein accession | NP_791190 |
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| Protein GI | 28868571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.498359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAA GTAGCACTAC AGCAGCGGCT GACACGCAAG GTCGGCAAAA CGCCTCGCCT
AACCGACTGA TTTTCATCTC CGTACTTGTG GCAACCATGG GCGCGCTCGC GTTTGGTTAT
GACACCGGTA TTATCGCCGG CGCATTGCCC TTCATGACGC TGCCGGCCGA TCAGGGCGGG
CTGGGTTTGA ATGCCTACAG CGAAGGGATG ATCACGGCTT CGCTGATCGT CGGTGCAGCC
TTCGGCTCAC TGGCCAGTGG CTATATTTCC GACCGTTTCG GACGACGCCT GACCCTGCGC
CTCCTGTCGG TGCTGTTCAT CGCGGGTGCG CTGGGTACGG CCATTGCGCC GTCCATTCCG
TTCATGGTCG CCGCGCGCTT CCTGCTGGGT ATCGCGGTGG GTGGCGGCTC GGCGACGGTG
CCGGTGTTCA TTGCCGAAAT CGCCGGCCCC TCGCGTCGTG CGCGGCTGGT CAGCCGCAAC
GAACTGATGA TCGTCAGCGG CCAGTTGCTC GCCTATGTGC TCAGCGCGGT CATGGCCGCG
CTGCTGCACA CGCCGGGCAT CTGGCGCTAT ATGCTGGCGA TCGCGATGGT GCCGGGGGTG
TTGCTGCTGA TCGGCACCTT CTTCGTACCT CCTTCGCCGC GCTGGCTGGC GTCCAAAGGC
CGTTTTGACG AAGCTCAGGA TGTGCTGGAG CAACTGCGCA GCAACAAGGA CGATGCGCAG
CGTGAAGTGG ACGAAATGAA AGCTCAGGAC GAGCAGGCGC GCAATCGTCC CAAGGCAAAG
GAATTGCTGC GTCAGCGCTG GGTCATCAAG CTGCTGCTGA TCGGCATCGG TCTGGGCTTT
ACCGCACAGC TCACCGGCGT GAACGCCTTC ATGTATTACA CACCGATCAT CCTCAAGAAT
ACCGGGATGG GCACCAACGC TGCGCTGACG GCCACCATCG GCAACGGCGT GGTGTCGGTC
ATCGCGACCC TGCTGGGCAT CTGGGCAATC GGTCGTTATG GTCGTCGCCA CTTGCTCATG
ACCGGTCTGG TGATGGTCAT CCTGATGCAG GCCGCGCTTG GCTGCGTACT GCAATTCATG
CCGCAGAACC TGACCCAGAG CTACACGGCC CTCGCCTGCA TTCTGGTGTT CCTGCTGTTC
ATGCAAATGT GCATTTCGCC GGTGTACTGG CTGTTGATGT CGGAACTGTT CCCCATGCAG
GTGCGGGGTT TGCTGACCGG CACGGCGGTG TCGATGCAGT GGCTGTTCAA CGCCTCGGTG
GCGTTTACCT TCCCGATTGC AGTGGATACC ATCGGCAACC CGACGTTCTT CATCTTTGCG
GCCATCAACG TCGGCTCGCT GATCTTCGTG TTCCTGTGCC TTCCCGAGAC CAAGGGCAAG
TCGCTTGAAC AGATCGAGAA ACACCTGAAG AAAGAGCTGT AA
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| Protein sequence | MSSSSTTAAA DTQGRQNASP NRLIFISVLV ATMGALAFGY DTGIIAGALP FMTLPADQGG
LGLNAYSEGM ITASLIVGAA FGSLASGYIS DRFGRRLTLR LLSVLFIAGA LGTAIAPSIP
FMVAARFLLG IAVGGGSATV PVFIAEIAGP SRRARLVSRN ELMIVSGQLL AYVLSAVMAA
LLHTPGIWRY MLAIAMVPGV LLLIGTFFVP PSPRWLASKG RFDEAQDVLE QLRSNKDDAQ
REVDEMKAQD EQARNRPKAK ELLRQRWVIK LLLIGIGLGF TAQLTGVNAF MYYTPIILKN
TGMGTNAALT ATIGNGVVSV IATLLGIWAI GRYGRRHLLM TGLVMVILMQ AALGCVLQFM
PQNLTQSYTA LACILVFLLF MQMCISPVYW LLMSELFPMQ VRGLLTGTAV SMQWLFNASV
AFTFPIAVDT IGNPTFFIFA AINVGSLIFV FLCLPETKGK SLEQIEKHLK KEL
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