| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1347 |
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| Symbol | |
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| ID | 1182983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1479036 |
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| End bp | 1480382 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392719 |
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| Product | gluconate transporter family protein |
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| Protein accession | NP_791174 |
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| Protein GI | 28868555 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTCACG ATACCCGTCT GATCATCTGC TGCCTGATTG CCATCGCCAC GATCATCGTA
TTGATCAGCG CAACCAGACT CCCGCCTTTT CTGTCGATTC TTGTAGGCAC CTTCATTGCC
GGTATCGGTG CGGGTTTGCC TGCCGAATCC GTTGCAAAAG CTTTCAGCAA AGGCGCTGGC
GCCATTCTGG GCGAGGCAGG CATCATTATC GCGCTGGGGG CGATGCTCGG TGCCCTGATG
GCCGAGTCGG GGGCCGCGGA TCGCATTGCT TCAACCCTGC TCAAACTGGG CAAAGGCCGG
GTGCTGCCGT GGATAATGGC GCTGGTGGCC ATGGTCATCG GCCTGCCGCT GTTCTTTGAA
GTGGGTCTGG TGCTGATGGT GCCGATCATT TTCGTCATGG CTCGTCAGTC CGGCCAGCCA
CTGCTGAAAA TCGCGATTCC GGCACTGGCG GGCATGACCA CGCTGCATGC CTTGATGCCG
CCACACCCCG GGCCGCTGAT CGCCGTCAGT GCCTTGCACG CTGATCTGGG CCTGACCATG
CTGTTGGGGC TGTGCATTGC CGTGCCGGCC GTGATTCTCG CCGGCCCTGT GTATGGCAAC
TGGTTGTCCG GGCGCATGCA CATCCAGGAG CCTGCCGAGC TGAGCGAGTT GTTCAGTGCC
AAGCCTGATA CCCGTCGCCA GCCAGGCTTC GGTATCTCGC TGCTGATCAT TCTGCTGCCC
GTGATTCTCA TGCTCGGCAG CACGCTGGCC AAAGTCACGA TGGAGCCTGA AAGCACTGTC
GCGCTGACCC TGAAATTTCT CGGCGAACCG CTGGTGGCTT TGGGTATCGC GGTGCTGGCT
GCAACAGTCT GCCTGGGCTG GGCCAATGGG CTTTCCCGCG ACCACGTCGG CGGTACGTTG
CGCAAAAGCC TCGCACCGAT TGCCGTGCTG TTGTTGACCA TCGGTGCCGG TGGCGGCCTC
AAGCAAACGT TGCTGGACGC CGGCGTCAGC CAGACCATCA GCAAGGTGGC AGAAGGCGCA
CAGATGCCGT ACCTGCTGCT GGCCTGGCTG ATCGCCGTGG CGCTGCGTCA GGCAACCGGT
TCCGCCACCG TTGCGACCAC CACCACCGCC GGCATCCTCG CACCCATGAT GGCAGGGCTC
GCACCGGTTC AGGCATCACT GATCGCGCTG GTCATCGGCG CAGGTTCGGT GTTCTTCTGC
CATGTAAACG ACGCAGGTTT CTGGATGGTC CGCGAATACT TCGGCCTGCA ACTGAAACAG
ACCCTCTGGG TCTGGTCGGT GCTGCAGACG ATTGTGTCGG TGGTCGGACT TATAGGCACG
TTGCTGTTGT GGCATTGGCT GGTTTGA
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| Protein sequence | MFHDTRLIIC CLIAIATIIV LISATRLPPF LSILVGTFIA GIGAGLPAES VAKAFSKGAG
AILGEAGIII ALGAMLGALM AESGAADRIA STLLKLGKGR VLPWIMALVA MVIGLPLFFE
VGLVLMVPII FVMARQSGQP LLKIAIPALA GMTTLHALMP PHPGPLIAVS ALHADLGLTM
LLGLCIAVPA VILAGPVYGN WLSGRMHIQE PAELSELFSA KPDTRRQPGF GISLLIILLP
VILMLGSTLA KVTMEPESTV ALTLKFLGEP LVALGIAVLA ATVCLGWANG LSRDHVGGTL
RKSLAPIAVL LLTIGAGGGL KQTLLDAGVS QTISKVAEGA QMPYLLLAWL IAVALRQATG
SATVATTTTA GILAPMMAGL APVQASLIAL VIGAGSVFFC HVNDAGFWMV REYFGLQLKQ
TLWVWSVLQT IVSVVGLIGT LLLWHWLV
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