Gene PSPTO_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1333 
Symbol 
ID1182969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1463091 
End bp1464086 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content58% 
IMG OID637392705 
Producthypothetical protein 
Protein accessionNP_791160 
Protein GI28868541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCA GCAAGCCCAT CACCCGCGCA TTCTGCGTCG AATTACAACA AGAGTTGTCG 
ATTGCCGCTG CCCGCCGCGA GTACTTTTCC CAGGAACCGC CACGCAAGCG CTTCGAGTTT
CTCTGCTCCA ACGAAGCTTG CAGAGCGCTG GGCGCTAAAG TGACAGGGGT TCGCTACGAC
GTGAAGCCAC AGGACAACCC GACCTTTGTC GCTGCGCATT TTCGCGCCAA CCCGCATCAC
GATCATCATC CGGACTGTGA GTGGGTGGAT GAGAGCGCAG ATGAAAAGCC GGACATCCCG
GTTGAAGAAA CCGATGTTCA GACGCGCCTG CGCCAGGCCA AGCGTAAGCT GGATGATTAC
ATCGACATAT TCGACCCAAC GCTCAAAGCA CCGAGCAAAG AGAAATCCGG GGAAGAAAAA
GCCGGTGCAG GCAACCCACA GCCCCCCGTC AGCCAGCCAT TGACCGAGCC CGCGACACCC
AGGGCCGCTC GCTACAGCGA AACCCGCACC AACAACCTGG AGCGCCTGGT AGACAGCTAT
CGACAGGCCA AGGCCGAGTT GTCACTGGAC GATTTCAAGC TGTTGAAACT GAGAATTCCC
GGCCAGGGCG AAGTCGCGTT GCGCTCGTAT TTTCGCCATA TCAAATTCGC CAAATCGGGC
GACAACGGCC GCGTACTGTT TGGCGGCGGG CTGATAGAAC AACGCTACGG GCAGGGCTTC
AAATTCAAAT TCTTCGACCG CCTCGACGGC AAACTGGTGA CCCTCTACGT ATCACCTGCG
CAAATGCAGG CCTACCGCTC CAGCCGCTAC ATCAGCGAAC TGCTCAGCCA TGCGGATGAG
GTAAAGTTCT TCACGGTGTA CGCACTGGGC ACCGTCACCC AAAGCCCGTC AGGCAAGAGC
TACAGCGTCG AGGTCGATGA CCTGCGGCAC CTGGCAATTG TGCTGGGGCC AGCGAAAGAG
CTGGTTGAAG AAGGGAAGGC TGCGGGGGGT GAGTGA
 
Protein sequence
MKPSKPITRA FCVELQQELS IAAARREYFS QEPPRKRFEF LCSNEACRAL GAKVTGVRYD 
VKPQDNPTFV AAHFRANPHH DHHPDCEWVD ESADEKPDIP VEETDVQTRL RQAKRKLDDY
IDIFDPTLKA PSKEKSGEEK AGAGNPQPPV SQPLTEPATP RAARYSETRT NNLERLVDSY
RQAKAELSLD DFKLLKLRIP GQGEVALRSY FRHIKFAKSG DNGRVLFGGG LIEQRYGQGF
KFKFFDRLDG KLVTLYVSPA QMQAYRSSRY ISELLSHADE VKFFTVYALG TVTQSPSGKS
YSVEVDDLRH LAIVLGPAKE LVEEGKAAGG E