Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1333 |
Symbol | |
ID | 1182969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1463091 |
End bp | 1464086 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392705 |
Product | hypothetical protein |
Protein accession | NP_791160 |
Protein GI | 28868541 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCCA GCAAGCCCAT CACCCGCGCA TTCTGCGTCG AATTACAACA AGAGTTGTCG ATTGCCGCTG CCCGCCGCGA GTACTTTTCC CAGGAACCGC CACGCAAGCG CTTCGAGTTT CTCTGCTCCA ACGAAGCTTG CAGAGCGCTG GGCGCTAAAG TGACAGGGGT TCGCTACGAC GTGAAGCCAC AGGACAACCC GACCTTTGTC GCTGCGCATT TTCGCGCCAA CCCGCATCAC GATCATCATC CGGACTGTGA GTGGGTGGAT GAGAGCGCAG ATGAAAAGCC GGACATCCCG GTTGAAGAAA CCGATGTTCA GACGCGCCTG CGCCAGGCCA AGCGTAAGCT GGATGATTAC ATCGACATAT TCGACCCAAC GCTCAAAGCA CCGAGCAAAG AGAAATCCGG GGAAGAAAAA GCCGGTGCAG GCAACCCACA GCCCCCCGTC AGCCAGCCAT TGACCGAGCC CGCGACACCC AGGGCCGCTC GCTACAGCGA AACCCGCACC AACAACCTGG AGCGCCTGGT AGACAGCTAT CGACAGGCCA AGGCCGAGTT GTCACTGGAC GATTTCAAGC TGTTGAAACT GAGAATTCCC GGCCAGGGCG AAGTCGCGTT GCGCTCGTAT TTTCGCCATA TCAAATTCGC CAAATCGGGC GACAACGGCC GCGTACTGTT TGGCGGCGGG CTGATAGAAC AACGCTACGG GCAGGGCTTC AAATTCAAAT TCTTCGACCG CCTCGACGGC AAACTGGTGA CCCTCTACGT ATCACCTGCG CAAATGCAGG CCTACCGCTC CAGCCGCTAC ATCAGCGAAC TGCTCAGCCA TGCGGATGAG GTAAAGTTCT TCACGGTGTA CGCACTGGGC ACCGTCACCC AAAGCCCGTC AGGCAAGAGC TACAGCGTCG AGGTCGATGA CCTGCGGCAC CTGGCAATTG TGCTGGGGCC AGCGAAAGAG CTGGTTGAAG AAGGGAAGGC TGCGGGGGGT GAGTGA
|
Protein sequence | MKPSKPITRA FCVELQQELS IAAARREYFS QEPPRKRFEF LCSNEACRAL GAKVTGVRYD VKPQDNPTFV AAHFRANPHH DHHPDCEWVD ESADEKPDIP VEETDVQTRL RQAKRKLDDY IDIFDPTLKA PSKEKSGEEK AGAGNPQPPV SQPLTEPATP RAARYSETRT NNLERLVDSY RQAKAELSLD DFKLLKLRIP GQGEVALRSY FRHIKFAKSG DNGRVLFGGG LIEQRYGQGF KFKFFDRLDG KLVTLYVSPA QMQAYRSSRY ISELLSHADE VKFFTVYALG TVTQSPSGKS YSVEVDDLRH LAIVLGPAKE LVEEGKAAGG E
|
| |