Gene PSPTO_1327 details

Gene Information

• Locus tag: PSPTO_1327
• Symbol: cyoC
• ID: 1182963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1458179
• End bp: 1458811
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392699
• Product: cytochrome o ubiquinol oxidase, subunit III
• Protein accession: NP_791154
• Protein GI: 28868535
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3
• TIGRFAM ID: [TIGR02842] cytochrome o ubiquinol oxidase, subunit III

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAATA CTGCAATTAA CTCCGGAGCC CACGATCACG GTCACGACCA TGATCACGGG 
CACGACGATC ACCACGACAG CGGTGGCATG ACGGTCTACG GCTTCTGGCT GTACCTGATG 
ACCGACTGCG TGTTGTTCGC CTCGTTCTTC GCGGTCTACG CCGTGATGGT CAACAGCGTC 
GCGGGTGGCC CGTCGGGCCA GGACATCTTC CTGCTGCCAT TCGTGGCCGT GGAAACCGCG 
TTCCTGCTGG TCAGTAGTAT CACGTACGGC TTCGCCATGC TGGCGCTGTA CAAGGGCAAG 
AAGAGTCAGG TGCTGGGCTG GCTGGCACTG ACCTTCCTGT GTGGTGCTGC GTTTATCGGT 
ATGGAAATCT ATGAATTCCA TCACCTGATC CACGAAGGCT ACGGTCCGAG CCGCAGTGGT 
TTCCTCTCAG CGTTCTTTGC GCTGGTCGGT CTCCACGGCG TCCACGTGAC CAGCGGTCTG 
ATCTGGATGG CGATCATGAT GTTCCAGGTC CAGAAGAAGG GCCTGACCAA CACCAACAAG 
ACGCGCCTGA GCTGCCTGAG TCTGTTCTGG CACTTCCTGG ACGTTGTCTG GATCGGCGTG 
TTCACCGTTG TCTATCTGAT GGGAGCTTTG TAA 

 

Protein sequence

MSNTAINSGA HDHGHDHDHG HDDHHDSGGM TVYGFWLYLM TDCVLFASFF AVYAVMVNSV 
AGGPSGQDIF LLPFVAVETA FLLVSSITYG FAMLALYKGK KSQVLGWLAL TFLCGAAFIG 
MEIYEFHHLI HEGYGPSRSG FLSAFFALVG LHGVHVTSGL IWMAIMMFQV QKKGLTNTNK 
TRLSCLSLFW HFLDVVWIGV FTVVYLMGAL