Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1318 |
Symbol | |
ID | 1182954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1449950 |
End bp | 1450948 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637392690 |
Product | hypothetical protein |
Protein accession | NP_791145 |
Protein GI | 28868526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.78443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTT TGTCTGCCAA ACATTGGCTA CGGTCCATTG TTGTGCTGCT GATGCTGAGC CCGAATTGCG TTTTCGCATT GGTCTGTACC ACTCAGGGTT CTGGCGAAAG CGAGATCCAC GATGATTTGA ACAGCACTGT GGCGATCCCC GAATCGATTC CCAGTGGCGA GGTCGTCTGG CGTTCCGAGC CATTGAATGT ACAGGTCGAG TGCTCCAAGG ATGGCTTGCA GTCGGTCGAA GAAGAGATTT TCATCTACCT GAACCCGGAC AATCGGGTGA TTGGCCAGGG TATTCGTGCC GGTCTGACCC TGCGCGGCGC CGATTACCTG CAAGGCAGCG GGCGCATCAG TACCGGCAAC TTTCTGCCGA TCTGCCATGA AGGCGCGGAC AACATCGGTA ACTGCCCGAA GGTGCGCTTC ACTCTGGCGT TTTCCGTGTT CATTCAGAAG TTCGGCGCCA CGCCACCATC GGGCGTTGCC AGCGATCTGC TCGACTACCG GTTTTTTCAG CTGGGCGGCG CAACAGACAC GAATCGGGTG CCAGGGCGTA GCCTCAGTTA TGTGATCAAC AACCTCAGAG GACTGCGTTT TGTGGCCTGC GATGCCGACC TGACGGTAAG CCCGGAAACC GTGGAATTCG GCGACGTGGC GATCCACCAG GTGGTGGTCG GCAAATTGAT CGCCACGCAG ACTTTTTCCC TGCAGACCAG CCGGTCGTGC GATTCACCGT TCAGCATCGA TGCGCGTTTC AGGCCGATAA CCGGTACGCT GCAGGGCGAG TTGCTCGTTC CCGTGGCCAA CGATTCGTTG GGCATACTCA TCACCAGCGC GGTCAATGGT GAGCCATTGC GTTACAACGA GCCTTTCCAT CTGGCGGAGC TGTTGGGCGA AACCAATGCT GCCAGTGCGG ACTTCAATGC CGAATTGCAC TGGAACACCG ACAAGCCAAG GCCCGGGCCA TTCGATGCGG AGATCACGGT GGATCTGTTT TATAAATGA
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Protein sequence | MKLLSAKHWL RSIVVLLMLS PNCVFALVCT TQGSGESEIH DDLNSTVAIP ESIPSGEVVW RSEPLNVQVE CSKDGLQSVE EEIFIYLNPD NRVIGQGIRA GLTLRGADYL QGSGRISTGN FLPICHEGAD NIGNCPKVRF TLAFSVFIQK FGATPPSGVA SDLLDYRFFQ LGGATDTNRV PGRSLSYVIN NLRGLRFVAC DADLTVSPET VEFGDVAIHQ VVVGKLIATQ TFSLQTSRSC DSPFSIDARF RPITGTLQGE LLVPVANDSL GILITSAVNG EPLRYNEPFH LAELLGETNA ASADFNAELH WNTDKPRPGP FDAEITVDLF YK
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