Gene PSPTO_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1318 
Symbol 
ID1182954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1449950 
End bp1450948 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content57% 
IMG OID637392690 
Producthypothetical protein 
Protein accessionNP_791145 
Protein GI28868526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.78443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT TGTCTGCCAA ACATTGGCTA CGGTCCATTG TTGTGCTGCT GATGCTGAGC 
CCGAATTGCG TTTTCGCATT GGTCTGTACC ACTCAGGGTT CTGGCGAAAG CGAGATCCAC
GATGATTTGA ACAGCACTGT GGCGATCCCC GAATCGATTC CCAGTGGCGA GGTCGTCTGG
CGTTCCGAGC CATTGAATGT ACAGGTCGAG TGCTCCAAGG ATGGCTTGCA GTCGGTCGAA
GAAGAGATTT TCATCTACCT GAACCCGGAC AATCGGGTGA TTGGCCAGGG TATTCGTGCC
GGTCTGACCC TGCGCGGCGC CGATTACCTG CAAGGCAGCG GGCGCATCAG TACCGGCAAC
TTTCTGCCGA TCTGCCATGA AGGCGCGGAC AACATCGGTA ACTGCCCGAA GGTGCGCTTC
ACTCTGGCGT TTTCCGTGTT CATTCAGAAG TTCGGCGCCA CGCCACCATC GGGCGTTGCC
AGCGATCTGC TCGACTACCG GTTTTTTCAG CTGGGCGGCG CAACAGACAC GAATCGGGTG
CCAGGGCGTA GCCTCAGTTA TGTGATCAAC AACCTCAGAG GACTGCGTTT TGTGGCCTGC
GATGCCGACC TGACGGTAAG CCCGGAAACC GTGGAATTCG GCGACGTGGC GATCCACCAG
GTGGTGGTCG GCAAATTGAT CGCCACGCAG ACTTTTTCCC TGCAGACCAG CCGGTCGTGC
GATTCACCGT TCAGCATCGA TGCGCGTTTC AGGCCGATAA CCGGTACGCT GCAGGGCGAG
TTGCTCGTTC CCGTGGCCAA CGATTCGTTG GGCATACTCA TCACCAGCGC GGTCAATGGT
GAGCCATTGC GTTACAACGA GCCTTTCCAT CTGGCGGAGC TGTTGGGCGA AACCAATGCT
GCCAGTGCGG ACTTCAATGC CGAATTGCAC TGGAACACCG ACAAGCCAAG GCCCGGGCCA
TTCGATGCGG AGATCACGGT GGATCTGTTT TATAAATGA
 
Protein sequence
MKLLSAKHWL RSIVVLLMLS PNCVFALVCT TQGSGESEIH DDLNSTVAIP ESIPSGEVVW 
RSEPLNVQVE CSKDGLQSVE EEIFIYLNPD NRVIGQGIRA GLTLRGADYL QGSGRISTGN
FLPICHEGAD NIGNCPKVRF TLAFSVFIQK FGATPPSGVA SDLLDYRFFQ LGGATDTNRV
PGRSLSYVIN NLRGLRFVAC DADLTVSPET VEFGDVAIHQ VVVGKLIATQ TFSLQTSRSC
DSPFSIDARF RPITGTLQGE LLVPVANDSL GILITSAVNG EPLRYNEPFH LAELLGETNA
ASADFNAELH WNTDKPRPGP FDAEITVDLF YK