| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1317 |
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| Symbol | |
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| ID | 1182953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1449166 |
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| End bp | 1449948 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392689 |
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| Product | fimbral chaperone protein |
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| Protein accession | NP_791144 |
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| Protein GI | 28868525 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.367695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA TTGTTCAGGT GCGCAGGCTG CTGGTGGTGG TGCTTCTGGC AAGCAGCGTC
GCGGCGCAAG GGGCGATAGC GCTCAGTGGA ACGCGGCTGA TCTTCGATGG CCGGTATCAC
GAGGTGAGTA TCGGGGTGCG CAATCGCGGC AAGGCCGAGG CACTCGTGCA GACCTGGCTG
AGCGATGCAC GTGATGACGG CGACAGGTTG CCGGCTGAAC GCAGGTCGCT GCCCTTTGTT
GTCACTCCAC CTCTGACGCG CCTGTCGGCT GGCGACCGGC AGGTGCTGCG TGTGCTGTAC
CAGGGCGCAG GCTTGCCGCA GGAGCGTGAA TCGTTGTTGC ATCTGTACGT GCTCGAGGTG
CCCCGCCGCC AGAACGGCGT TCGACAACTG AATATTGCTG TGCGTCAGCG CATCAATGTG
TTCTATCGCC CTCCCGGACT TGCCGGAGAT CCGGCCGACA CTGCCAGTGC ATTGTTGTGG
GCGTTGACTT CAAACCAGTC GGCCAGCGTG GTGCTGACAG TCCACAACCC CACGCCTTAT
CACGCTTCGC TGCAAGCACT GCACATCGAT GGTGTTCAGG TCGCAGAGTC ACTGTTACTG
GCGCCGGGCG AACAGGTTGA ACGGGTTTTA CCCAAGAACG TAATGCCCTC TTTGCACCCT
CGTTTTTCTT ACCGGGCCCT GACCGACTAT GGCGGTCAGC GACGCTACTG CGCACGGTTT
AACGGGCAGG CGACCTTGAC GGCGCGCCTG CTGGAGAACA ACGCCTTTCA GGAAGAATGC
TGA
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| Protein sequence | MNMIVQVRRL LVVVLLASSV AAQGAIALSG TRLIFDGRYH EVSIGVRNRG KAEALVQTWL
SDARDDGDRL PAERRSLPFV VTPPLTRLSA GDRQVLRVLY QGAGLPQERE SLLHLYVLEV
PRRQNGVRQL NIAVRQRINV FYRPPGLAGD PADTASALLW ALTSNQSASV VLTVHNPTPY
HASLQALHID GVQVAESLLL APGEQVERVL PKNVMPSLHP RFSYRALTDY GGQRRYCARF
NGQATLTARL LENNAFQEEC
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