| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1312 |
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| Symbol | |
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| ID | 1182948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1443875 |
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| End bp | 1444459 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637392686 |
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| Product | fimbral biosynthesis protein |
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| Protein accession | NP_791141 |
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| Protein GI | 28868522 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.467009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC TTTCTCTTAC ATTGGCAGTT CTGGGCGTAA TGGGCTTTGG TATGGCAGGT
ACTGCCAGTG CTGCGAACAA CGGCAAAATC ATCTTTAACG GAACACTGAC CAATATATCC
TGCGATGTAG GTCCTGGGGC GGGCGTCAGC GCGGGCACCA ATCCGGGTGA AATCAATGTC
GACCTGGGGA ACGTGTCCTT CTCCGATATC GGCGTTTCCA GCGAAAACCG GTTTGAAACG
GCAATGCCTA TTCAGTTGCT GGTCAACTGC AGCGCGGGTG CCGATCAGTA CAACATGGTG
AAGATGCGCC TGACTGCCCG TAACGGCAGC GGTCTGGACA ATAACGACGC CAAACTTCTG
CGCACCACCG GGGCGGCGGA TGGCGTAGGT ATCGGCCTGC TCAATGCATC GAGCGTACTC
ATGGATCTGA GTGGTACTGA AACCATCGAT ACCACGCTGA TCAAGGATGG TGTCAGCGGC
GCTACTGCCG AGATCAACTT TGGTGCGGTC TATGTGCTTA ATGGCACACC GACCAATCCG
GGGAATGCCG ACGGCTTCCT GCCGTTCGTG ATGGATTACG AGTAA
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| Protein sequence | MKKLSLTLAV LGVMGFGMAG TASAANNGKI IFNGTLTNIS CDVGPGAGVS AGTNPGEINV
DLGNVSFSDI GVSSENRFET AMPIQLLVNC SAGADQYNMV KMRLTARNGS GLDNNDAKLL
RTTGAADGVG IGLLNASSVL MDLSGTETID TTLIKDGVSG ATAEINFGAV YVLNGTPTNP
GNADGFLPFV MDYE
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