| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1299 |
|---|
| Symbol | hexR |
|---|
| ID | 1182935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1428566 |
|---|
| End bp | 1429432 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637392673 |
|---|
| Product | Hex regulon repressor |
|---|
| Protein accession | NP_791128 |
|---|
| Protein GI | 28868509 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.776105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG TAAGAAACCT CCTGGAGCAA ATCCAGGGCC GACTCGATGA GCTGAACAAG
GCCGAGCGCA AAGTGGCCGA GGTGATTCTG CTTAACCCGC AGATGGCCAC GCGTCTGAGC
ATTGCAGCGC TTGCCCAGGC GGCCAAAGTC AGCGAGCCGA CGGTCAACCG CTTCTGCCGT
TCGTTCAGCG TCAGCGGCTA TCCTGAGCTC AAGCTGCAAC TGGCCCAGAG CCTGGCCAGT
GGCGCGGCCT ATGTCAGCCG TGCGGTGGAA GCCGACGACA ATCCCGAGGC ATACACCCAG
AAGATTTTCG GCAGCGCGAT TGCCTCGCTG GACAGCGCCT GTCAGCAACT GGACCCGGCG
CTGGTCAGCA AGTCTGTGGA CATGCTGATT CAGGCGCGGC AGATCCACTT TTTCGGGCTG
GGTGCCTCTG CGCCGGTGGC GCTCGATGCG CAGCATAAAT TCTTCCGCTT CAACCTGGCG
GTCACGGCGC ACGCTGACGT GTTGATGCAG CGAATGATTG CGTCGGTGGC TCACACTGGC
GAGTTGTTCG TGATCATCTC CTACACCGGC CGTACCCGCG AGCTGGTGGA GGTGGCACGT
ATCGCACGGG CCAATGGCGC CTCGGTGCTG GGCCTGACGG CCGCGGGTTC GCCACTGGCG
CAGGCCAGCA CCGTGAGCTT GAATATTCCG CTGCCGGAGG ACACCGATAT TTACATGCCG
ATGACCTCGC GGATCATTCA GTTGACGGTT CTCGACGTGC TGGCCACCGG CATGACCTTG
CGCCGCGGCG TTGATTTCCA GCCACACCTG CGCAAGATCA AGGAAAGCCT GAACGACAGC
CGCTATCCGA TCGAGGATCA GGGCTGA
|
|---|
| Protein sequence | MDRVRNLLEQ IQGRLDELNK AERKVAEVIL LNPQMATRLS IAALAQAAKV SEPTVNRFCR
SFSVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDNPEAYTQ KIFGSAIASL DSACQQLDPA
LVSKSVDMLI QARQIHFFGL GASAPVALDA QHKFFRFNLA VTAHADVLMQ RMIASVAHTG
ELFVIISYTG RTRELVEVAR IARANGASVL GLTAAGSPLA QASTVSLNIP LPEDTDIYMP
MTSRIIQLTV LDVLATGMTL RRGVDFQPHL RKIKESLNDS RYPIEDQG
|
|---|
| |