| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1289 |
|---|
| Symbol | glk |
|---|
| ID | 1182925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1418302 |
|---|
| End bp | 1419267 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637392663 |
|---|
| Product | glucokinase |
|---|
| Protein accession | NP_791118 |
|---|
| Protein GI | 28868499 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0837] Glucokinase |
|---|
| TIGRFAM ID | [TIGR00749] glucokinase, proteobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTGG CCCTGGTCGG TGATATAGGC GGTACCAATG CACGTTTTGC CATTTGGGAA
GACGACACGC TGCATTCTGT CCGGGTGTTC CCGACCATTG ACTACGCAGG CCCCGAAAAG
GCCATCGAAG TCTATCTGCA GGACCTTGAA TTGCAGCGCG GTGACATTGG CTATGTGTGC
CTGGCGGTCG CCGGGCCGGT CGATGGCGAT CTGTTTCAGT TCACCAACAG CCACTGGCAA
CTGAGCCGTG AGGCGTTCTG CGCCGACCTG AAAGTCGATC ACCTGCTGCT GATCAACGAC
TTCACCGCCA TGGCGCTGGG CATGACCCGG CTCAAGGACG ATGAATACCT GACGGTCTGT
CATGGCGTCG GCAAGCCGGA TCGCCCGCGC GTGGTGGTCG GGCCGGGCAC TGGGCTGGGC
ATCGGCACGC TGATCAAACT GGAAGACAGC CGCTGGATGG CCTTGCCGGG CGAGGGCGGG
CATGCCGACC TGCCAATCGG CACGGCGCGC GAGGCCCTGC TGTGGACGCG GCTGATGGCC
GAGCACGAAC ATGTCAGCGC CGAAGTGGTG CTCAGTGGTG CGGGCCTGTT GTTGCTGTAT
CAGGTCAGTT GCGCGCTGGA CGGCATGGAC GCAGAGCTCA AGTCGCCTGC TGCGATCACG
TCGGCTGCGC TGGCAGGCGA TCCGGTCGCG GCGGCGGTGC TTGAACAGTT CTGCGTGTTC
CTCGGCAGAG TGGTCGGCAA CAACGTTCTG ACCCTGGGCA GTCTGGGCGG GGTCTACATC
GTGGGTGGCG TGGTGCCACG TTTCACAGAA TTCTTCATGA ACAGCGGCTT CAAGCGCGCC
ATGGGCGAGA AGGGCGTGAT GAGCGGCTAC TTCAAGAACC TGCCGGTCTG GCTGGTCACC
GCCGAGTACC CAGGGCTTAT GGGTTCAGGC GTTGCGCTGC AACAGGCGTT CGGTTCGCAA
ATTTGA
|
|---|
| Protein sequence | MKLALVGDIG GTNARFAIWE DDTLHSVRVF PTIDYAGPEK AIEVYLQDLE LQRGDIGYVC
LAVAGPVDGD LFQFTNSHWQ LSREAFCADL KVDHLLLIND FTAMALGMTR LKDDEYLTVC
HGVGKPDRPR VVVGPGTGLG IGTLIKLEDS RWMALPGEGG HADLPIGTAR EALLWTRLMA
EHEHVSAEVV LSGAGLLLLY QVSCALDGMD AELKSPAAIT SAALAGDPVA AAVLEQFCVF
LGRVVGNNVL TLGSLGGVYI VGGVVPRFTE FFMNSGFKRA MGEKGVMSGY FKNLPVWLVT
AEYPGLMGSG VALQQAFGSQ I
|
|---|
| |