| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1284 |
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| Symbol | |
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| ID | 1182920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1410889 |
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| End bp | 1413462 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392658 |
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| Product | TonB-dependent outer membrane heme receptor |
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| Protein accession | NP_791113 |
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| Protein GI | 28868494 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCA CGTTCACGCC TGCCGTGCAA AACCGCGCAC GACTCAGACT TTCGCTGCTG
ACCGTCGCGG TACTGGGCGC CAGCCTGCAG GCGATTCCTG CCCACGCCGC CGCCGAAACC
AACCGGTCCG TGCGCCCTGC AGGCACTTAC AGCTTCTCGA TCGGTCCGCA ATCGCTGGTG
TCGGCGCTCA ATGAATTCAG CCGCATCACC GGCTGGCAGG TGGGCGTGTC ATCGGATTTC
GCGCAAAACG TCACCTCCCC GGGTGCCCGC GGCAACCTGA GCCCTGCCCA GGCGCTGGAC
GCCCTGCTGG CCGGCAGCTC GCTGAGCTAT CGCAACCTGG GCAACAACAA CGCGGTGCTC
GAAAAACGCG CCGCGGGCGT GATGGCTCTC GATCAGATCA CCGTCAGCGC CACGCGTCAG
GCTCAGGAAG TGGTGACAGT GCCGAGTACC GTCAGCGTGC ATTCGCGTGA ACAGCTGGAT
CGCAACAACG TCAATACCAT CCGTGACCTG GTGCGCTACG AGCCGGGTGT TTCGGTCGGC
GGTGCTGGCC AGCGCGCAGG CACGACCGGC TATAACATTC GCGGCATCGA CGGTAACCGC
ATCATGACTC AGGTCGACGG CGTTGAAGTT CCCGACAGTT TCTTCACCGG GCCTTATGCG
CAAACCCACC GCAACTATGT CGACCCGGAG ATCGTCAAGC GCGTCGAAAT CCTCCGCGGC
CCTGCCTCGG CGCTGTACGG CAGCAGCGCC ATTGGCGGCG TGGTCAGTTA TTACACACTG
GACCCGGATG ACATCATCAA GCCCGGCAAG GATGTCGGCG CGCGCCTCAA GACCGGTTAC
AGCTCGGCAG ACGAAAGCTG GCTGAACTCG GCCACCGTCG CAGGTCGTCA GGGCGAGTTC
GACGGCTTGC TGCACGTGAG CCAGCGCAAT GGTCACGAAA CCGAATCCTA TGGTGAAACA
GGTGGCACAG GCCTGAGCCG TACCGAAGCC AACCCCGAGG ATGCGCGCAG CACCAACGTG
CTGGCCAAGC TGGGTTGGAA CTACGCCGAC GGCTCGCGGC TGGCGCTGGC TTACGAAAAG
TACAAGGACG ACCGCAACAC CAATCTGAAA AGCGCAGTGG GCGGGCCGTT CACCAATGGC
AGCGGGCTGG GCATGTATCA GTCGCGCGAA AGTAACGACA CCATCAGCCG CGAGCGTTTT
GGTATAGAAA ACAGCTTTGC CCTCGACAGC CTGCTGGCGG ACAACCTCAA ATGGAGCCTC
AATTACCAGA CCGCCAAGAC CGACCAGAGC ACTCAGGAAC GTTACTTCCC GTTTTCCCGC
GACGTGTATC GCCAGCGTGA AACGCAGTAC CAGGAAAAAC AGTGGATCTT CGATGCGCAG
CTGGATAAAG CATTCTCCAT TGCCAGCACC GACCATGTGC TGACCTACGG CACCACCCTC
AAGCAACAGA AAGTCACCGG GCTGCGCAGC GGCAGCGGGA CCTGCGCACG GGTGTTCGGC
ACCTGCCGCG TGGTCGGCGC AGACAGCCCG AGCGACCGAC TGGCCGCGAC CAGTGACTTC
CCCGACCCGA CCATCACCAG CTATGCACTG TTCGCGCAGG ATCAGATCAG CTGGAAAGAC
TGGACCTTTA TGCCCGGCGT ACGCTACGAC CACACCCGGC TCGACCCGAA GTTCACGCCA
GAATTTCTCA GGTCGGTCAG CCTCACCGAC CCAAGTCAGG CCAACGACGA AACGCGGACA
TGGCACCGCC TGTCGCCCAA GTTCGGCGTG ACCTACGCGT TCAGCGACGC CTACACCTGG
TACGGCCAGT ACGCCGAAGG TTTCCGCACC CCATCAGCCA AGGCCCTTTA TGGCCGCTTC
GAAAACCCGA CCGCCGGATA CGTGGTAGAG CCCAATCCGA ATCTGGAGCC GGAAACCAGC
AAGAGTTATG AAACCGGACT ACGCGGCCGC TTTGAATCCG GCTCGTTCGA CATCGCGGTG
TTCCATAACA AGTACCGCGA CTTCATCAAC GAGGACGCCA TCACCCCCGG CTACAGCGAG
CTCACGTTCC AGTCCAGCAA CATCAAGCAC GCCACCATGA AAGGCGCTGA AGTCAAAGGG
CGCATCAATC TCGACAGCCT CGGTGCGCCG AACGGCCTGT ACAGCCAGGC ATCCGTTGCC
TATGTGCATG GCCGCAACAA CGATACCGGC GAGCCGATCA ACAGCGTCAA CCCGCTGACC
GGCGTCATCG GCCTGGGGTA TGAGCAGCGA GACTATGGCA GTCAGCTGAG CTGGACGCTG
GTCAAACGCA AGACCCGCGT GGATGACAGC AGTTTCCACA GCCCGGACGG CACTTCCAGC
CAGTTCAAGA CCCCGGGCTT CGGCATTCTC GACCTGACCG GCTATTACAA GGTCAGCGAC
GACGTGACCG TCAATGCCGG CCTCTACAAC CTGACCGACA AGAAGTACTG GCGCTGGGAC
GATGTGCGCG GCTACGACGG CGTGGGCGAA GCCGGTGTGA CCGCACCGGC CAACCTGGAT
CGCCTGACCC AGCCGGGGCG CAATTTCAGC GTCAATGTGG TGTGGGATAT CTGA
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| Protein sequence | MSSTFTPAVQ NRARLRLSLL TVAVLGASLQ AIPAHAAAET NRSVRPAGTY SFSIGPQSLV
SALNEFSRIT GWQVGVSSDF AQNVTSPGAR GNLSPAQALD ALLAGSSLSY RNLGNNNAVL
EKRAAGVMAL DQITVSATRQ AQEVVTVPST VSVHSREQLD RNNVNTIRDL VRYEPGVSVG
GAGQRAGTTG YNIRGIDGNR IMTQVDGVEV PDSFFTGPYA QTHRNYVDPE IVKRVEILRG
PASALYGSSA IGGVVSYYTL DPDDIIKPGK DVGARLKTGY SSADESWLNS ATVAGRQGEF
DGLLHVSQRN GHETESYGET GGTGLSRTEA NPEDARSTNV LAKLGWNYAD GSRLALAYEK
YKDDRNTNLK SAVGGPFTNG SGLGMYQSRE SNDTISRERF GIENSFALDS LLADNLKWSL
NYQTAKTDQS TQERYFPFSR DVYRQRETQY QEKQWIFDAQ LDKAFSIAST DHVLTYGTTL
KQQKVTGLRS GSGTCARVFG TCRVVGADSP SDRLAATSDF PDPTITSYAL FAQDQISWKD
WTFMPGVRYD HTRLDPKFTP EFLRSVSLTD PSQANDETRT WHRLSPKFGV TYAFSDAYTW
YGQYAEGFRT PSAKALYGRF ENPTAGYVVE PNPNLEPETS KSYETGLRGR FESGSFDIAV
FHNKYRDFIN EDAITPGYSE LTFQSSNIKH ATMKGAEVKG RINLDSLGAP NGLYSQASVA
YVHGRNNDTG EPINSVNPLT GVIGLGYEQR DYGSQLSWTL VKRKTRVDDS SFHSPDGTSS
QFKTPGFGIL DLTGYYKVSD DVTVNAGLYN LTDKKYWRWD DVRGYDGVGE AGVTAPANLD
RLTQPGRNFS VNVVWDI
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