| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1280 |
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| Symbol | |
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| ID | 1182916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1407395 |
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| End bp | 1408903 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392654 |
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| Product | transcriptional regulator TyrR, putative |
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| Protein accession | NP_791109 |
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| Protein GI | 28868490 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCC ACGTCAGCTT CATCGACCGC GTTGGTATCA CCCAGGAAGT GCTGGCCATT
CTGGGTGGGC GCAATCTGAA TCTGGATGCC GTGGAGATGG TGCCGCCCAA TGTCTACATT
GATGCGCCGA CCCTAAGCCA TCAGATGCTC GAAGAACTCA AGGATGCCCT GTTTCGGGTG
CGTGGCGTAG AAGCCATTAC GGTGGTCGAT ATCCTCCCCG GCCAGCGTCG CCATCTGCAA
CTGGATGCGC TGCTGGCGGC AATGACCGAC CCGGTACTGG CACTGGACAG CGCAGGGCAT
GTGCTGCTGG CCAATCCTGC GCTCATAGCC CTGATCGGCC GTGAACCTGC AGGCGAACCC
ATCGCTGAAC TGTTCGCCGA CCCCGGCCTG CAGGCCGCGC TGCTGGAAAA CGGCTTTCGT
CTGCCGCTGC GCGAAATCAC CCTCAACGGT GAGGCGCTAT TGCTCGATGC CACACCGATC
ACCGAAGCGG GCGCTCTGAT TACCCTGTAC CTGCCCAGCC GCATCGGCGA ACGGCTGTCG
GCGCTGCACC ACGATCACGC CGAGGGTTTC GATGCACTGC TGGGCGATTC AGCCGCCATC
CGCACGCTCA AGGCGCGCGC GCAACGGGTG GCGGTGCTGG ACGCACCGCT GTTGATTCAG
GGCGAGACCG GCACCGGTAA AGAGCTGGTC GCGCGCGCCT GTCATGCCAG TAGCGCGCGC
CACGGCGAAC CGTTTTTGGC CTTGAACTGC GCCGCGCTGC CGGAAAACCT GGCCGAAAGC
GAACTGTTTG GTTACGCCCC CGGTGCCTTT ACCGGTGCGC AGCGCGGTGG CAAGCCGGGG
CTGATGGAGC TGGCCAACCA GGGCACGGTG TTTCTAGATG AGATCGGCGA AATGTCACCC
TACCTACAGG CCAAACTGTT ACGTTTTCTC AACGATGGCA GCTTCCGCCG CGTTGGCGGG
GACCGCGAAG TCAGGGTCAA TGTGCGCATT CTCAGCGCCA CTCACCGTGA CCTGGAAAAA
ATGGTCAGCG AAGGCACCTT CCGCGAAGAC CTTTTCTATC GCCTCAACGT CCTCAACCTG
GATGTACCGC CGCTGCGCGA GCGTGGTCAG GACATCCTGC TGCTGGCCCG TTACTTCATG
GAGCAGGCCT GCGCACAGAT TCAGCGGCCG GTCTGCAGGC TGGCCCACGG CACCTACCCT
GCCCTGCTGG GCAACCGCTG GCCGGGCAAT GTACGGCAGT TGCAGAACGT CATCTTCCGC
GCCGCCGCGA TCTGTGAAAA CACTCAAGTG GATATAGGCG ATCTGGACAT TGCAGGCACT
GCCGTCGCAC GTCAGAACGA CAGCGCGATC GACAGCCTCG AAAATGCCGT CGAAACATTT
GAAAAGGATT TACTGGAAAA ACTCTACGCA GACTATCCGT CCACACGCCA GTTAGCTGCA
CGCCTGCACA CCTCGCACAC CGCCATTGCG CACCGCTTGC GAAAGTATGG AATACCCGGC
AAGCGCTAG
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| Protein sequence | MRIHVSFIDR VGITQEVLAI LGGRNLNLDA VEMVPPNVYI DAPTLSHQML EELKDALFRV
RGVEAITVVD ILPGQRRHLQ LDALLAAMTD PVLALDSAGH VLLANPALIA LIGREPAGEP
IAELFADPGL QAALLENGFR LPLREITLNG EALLLDATPI TEAGALITLY LPSRIGERLS
ALHHDHAEGF DALLGDSAAI RTLKARAQRV AVLDAPLLIQ GETGTGKELV ARACHASSAR
HGEPFLALNC AALPENLAES ELFGYAPGAF TGAQRGGKPG LMELANQGTV FLDEIGEMSP
YLQAKLLRFL NDGSFRRVGG DREVRVNVRI LSATHRDLEK MVSEGTFRED LFYRLNVLNL
DVPPLRERGQ DILLLARYFM EQACAQIQRP VCRLAHGTYP ALLGNRWPGN VRQLQNVIFR
AAAICENTQV DIGDLDIAGT AVARQNDSAI DSLENAVETF EKDLLEKLYA DYPSTRQLAA
RLHTSHTAIA HRLRKYGIPG KR
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