| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1277 |
|---|
| Symbol | gcvH-2 |
|---|
| ID | 1182913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1402295 |
|---|
| End bp | 1402678 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637392652 |
|---|
| Product | glycine cleavage system H protein |
|---|
| Protein accession | NP_791107 |
|---|
| Protein GI | 28868488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.375217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGT TGCGATTCAC CGCTGACCAC GAGTGGCTAC GTGCCGAAGC AGACGGCAGT
GTCACGGTCG GCATCACGCC TTACGCCCAG GAATCGCTGG GTGACGTGGT CTTTGTGCAA
CTCCCGGAAT TACAGGCCTA CGCTCAACAC GCCGAAGTGT CAGTGGTTGA ATCGGTCAAA
GCCGCCAGCA GCATCAACAT GCCACTGGAC GGCGAAGTGG TCGAGGTCAA CGCTGTGCTC
GATGCCACCC CGGAACGGGT CAACGAAGAC GCCCTCGGCG CCGGCTGGTT CTTTCGTTTC
ATTCCGCAAG ACGCCTATGC CATTCACGGC CTGCTGGATC AGGACGCCTA CGACCGTCTG
ATCAAAGCCA ACGCCCAAGC CTGA
|
|---|
| Protein sequence | MSELRFTADH EWLRAEADGS VTVGITPYAQ ESLGDVVFVQ LPELQAYAQH AEVSVVESVK
AASSINMPLD GEVVEVNAVL DATPERVNED ALGAGWFFRF IPQDAYAIHG LLDQDAYDRL
IKANAQA
|
|---|
| |