Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1263 |
Symbol | |
ID | 1182899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1384741 |
End bp | 1385673 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392638 |
Product | hypothetical protein |
Protein accession | NP_791093 |
Protein GI | 28868474 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0732347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGT TGATTCTTCA CCACTACCCC ACGTCGCTGT TTGCCGAAAA AGCCCGTTTG ATGCTGGGCT TCAAGGGCGT TAACTGGCGT TCGGTGACCA TTCCTTCGAT CATGCCCAAG CCTGACCTGA CCGCGCTGAC CGGTGGCTAT CGCAAAACGC CGGTGTTGCA GATCGGCGCA GATATCTACT GTGACACGGC GCTGATGGCC CGGCGTCTGG AGCAGGAAAA AGCCTCGCCG GCCTTCTACC CGCAAGGCCA GGAGTTTGCC GTGGCCGGCC TGGCCGCCTG GGCCGACTCG GTGCTGTTTC TGCATGCAGT GAGCCTGGTG TTTCAGCCTG AATCGATGGC CGTGCGCTTT GCCAAAGTAC CGCCTGACGC CGCCAAGGCA TTCATTGCTG ACCGCTCCAT GCTGTTCAAC GGTGGCACCG CTTCGCGCCC GCCCGTCGAG CAGGTCAAAC ACCAATGGCC AACGTTCATG TCACGTCTTG AGTCGCAACT GTCGCACGGC GGTGACTTCC TGTTCGGTGC GCCTTCAATT GCCGATTTCT CGGTCGCCCA CACGCTGTGG TTCCTCAAAC AGACGCCAGT GACGGCGCCG TTTGTCGATG ATTACCCAAG TGTCAGCGTC TGGCTGGATC GCGTACTGGG ATTTGGCCAC GGCAGCTTGA GCGACCTGAG TTCCGCCGCT GCCATCGAAA TCGCCAGCAA CGCCACGCCC GCGCCTTTGC CCGATGAAAC CTTCATTGAC CCGAACGGCT TCAAGGCGGG CGATAAAGTC GCCATCGCCG CGGTCGACTA CGGCGTTGAA GCGGTTGAAG GCGAGCTGAT GTTTACCGGA CGCGAAGAAC TGATCCTGCG CCGCGAAGAC AATCGCGCCG GTGTGGTACA CGTGCACTTC CCGCGACTGG GTTTTCGGGT CGAGAAACGC TGA
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Protein sequence | MSELILHHYP TSLFAEKARL MLGFKGVNWR SVTIPSIMPK PDLTALTGGY RKTPVLQIGA DIYCDTALMA RRLEQEKASP AFYPQGQEFA VAGLAAWADS VLFLHAVSLV FQPESMAVRF AKVPPDAAKA FIADRSMLFN GGTASRPPVE QVKHQWPTFM SRLESQLSHG GDFLFGAPSI ADFSVAHTLW FLKQTPVTAP FVDDYPSVSV WLDRVLGFGH GSLSDLSSAA AIEIASNATP APLPDETFID PNGFKAGDKV AIAAVDYGVE AVEGELMFTG REELILRRED NRAGVVHVHF PRLGFRVEKR
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