| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1258 |
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| Symbol | |
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| ID | 1182894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1381652 |
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| End bp | 1382416 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392633 |
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| Product | amino acid ABC transporter, ATP-binding protein |
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| Protein accession | NP_791088 |
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| Protein GI | 28868469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.13929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAG TTATCAATAA GCCCCTGGGC GCTGAAGGCA TGATCCGCAT GGAGGGCGTC
CACAAGTGGT ACGGCCAGTT CCATGTGCTC AAGGACATCA ACCTGAATGT GCGCCAGGGC
GAACGTATCG TGCTGTGCGG CCCGTCTGGC TCGGGCAAGT CGACCACCAT TCGCTGCCTC
AACCGTCTGG AAGAGCACCA GCAGGGCCGT ATCATCGTTG ATGGCACCGA ACTGACTTCC
GACCTGAAGC AGATCGAAAC CATCCGCCGT GAAGTCGGCA TGGTGTTTCA GCACTTCAAC
CTGTTCCCGC ACCTGACCAT CCTGCAGAAC TGCACGCTGG CACCGATGTG GGTACGCAAG
ATGCCGAAGA AGAAAGCCGA AGAAATCGCC ATGCACTACA TTGAGCGTGT GCGTATTCCA
GAGCAGGCCC ACAAGTTTCC GGGTCAGCTT TCCGGTGGTC AGCAGCAGCG TGTGGCGATT
GCCCGTGCCT TGTGCATGAA GCCGAAAATC ATGCTGTTCG ACGAGCCGAC CTCGGCGCTT
GACCCGGAAA TGGTCAAGGA AGTACTCGAC ACCATGGTCG GCCTGGCGGA AGAGGGCATG
ACCATGCTCT GCGTGACTCA CGAGATGGGC TTTGCCCGCA CCGTGGCGAA CCGCGTGATC
TTCATGGACA AGGGCGAAAT CGTCGAACAG GCTGCACCGA ACGACTTCTT CGACAACCCG
CAAAGCGACC GCACCAAGCT GTTTCTCAGT CAGATCATTC ACTGA
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| Protein sequence | MSEVINKPLG AEGMIRMEGV HKWYGQFHVL KDINLNVRQG ERIVLCGPSG SGKSTTIRCL
NRLEEHQQGR IIVDGTELTS DLKQIETIRR EVGMVFQHFN LFPHLTILQN CTLAPMWVRK
MPKKKAEEIA MHYIERVRIP EQAHKFPGQL SGGQQQRVAI ARALCMKPKI MLFDEPTSAL
DPEMVKEVLD TMVGLAEEGM TMLCVTHEMG FARTVANRVI FMDKGEIVEQ AAPNDFFDNP
QSDRTKLFLS QIIH
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