| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1257 |
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| Symbol | |
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| ID | 1182893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1380544 |
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| End bp | 1381641 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392632 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_791087 |
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| Protein GI | 28868468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.154586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC ATACTTTCAA ACCTGATATG CCACCACCGG GCAAAGTGTT CGGTCCGGTC
GCGTGGATGC GGCAGAACCT GTTCTCCAGC TGGATCAACA CCCTGCTGAC CCTGTTCTCG
CTGTATCTGA TCTACCTGAT CGTTCCGCCG ATTCTCAGTT GGGCCCTGCT GGACGCCAAC
TGGATCGGTA CGACCAAGGA AGACTGCACC AAGGCGGGCG CCTGTTGGGT GTTCATCGAG
CAGCGCTTCG GTCAGTTCAT GTACGGCTAC TTTCCTAATG AACTGCGCTG GAGGGTCGAT
CTGACCGCAA TCCTGGCGAT TGTCGGTGCT GCGCCGCTGT TCATTTCGAA GTTTCCGCGC
AAGGCTGTGT ACGGCATCTG CTTTTTGCTG ATCTACCCGG TCGTTGCGTT CTACCTGCTG
CACGGCGGCG CGTTTGGTCT GACCAATGTA CCGACCAGCC AGTGGGGCGG TCTGATGCTG
ACCCTGGTGA TTGCCACCGT GGGTATCGTC GGTGCCTTGC CGCTGGGTAT TTTGCTGGCG
CTCGGCCGTC GCTCCAACAT GCCGGCCGTG CGTGTGGTGT GCGTGACGTT CATCGAGTTC
TGGCGTGGCG TGCCGTTGAT CACCGTACTG TTTATGTCGT CTGTGATGCT GCCGCTGTTC
ATGCCGGAAG GGATGAACTT CGACAAGCTG CTGCGGGCGC TGATCGGCGT GATTCTGTTC
CAGTCGGCGT ACATCGCCGA AGTGGTGCGC GGCGGGATGC AGGCCATTCC CAAGGGGCAA
TACGAAGCGG CCTCGGCGAT GGGCCTGGGT TACTGGCGCG CCATGGGTCT GGTGATTCTG
CCGCAGGCGT TGAAGATGGT CATTCCCGGC ATCGTCAACA CCTTCATTGC TTTGTTCAAA
GACACCAGCC TGGTGATCAT TATCGGCCTG TTCGACCTGC TTAACAGCGT CAAACAAGCC
ACCGCCGACC CGGCATGGCT GGGTATGGCC ACCGAAGGCT ACGTCTTCGC GGCCCTGGTG
TTCTGGATCT TCTGTTTCGG TATGTCCCGC TATTCCATGC ATTTGGAACA TAAGCTGGAC
ACAGGCCACA AGCGTTAG
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| Protein sequence | MTTHTFKPDM PPPGKVFGPV AWMRQNLFSS WINTLLTLFS LYLIYLIVPP ILSWALLDAN
WIGTTKEDCT KAGACWVFIE QRFGQFMYGY FPNELRWRVD LTAILAIVGA APLFISKFPR
KAVYGICFLL IYPVVAFYLL HGGAFGLTNV PTSQWGGLML TLVIATVGIV GALPLGILLA
LGRRSNMPAV RVVCVTFIEF WRGVPLITVL FMSSVMLPLF MPEGMNFDKL LRALIGVILF
QSAYIAEVVR GGMQAIPKGQ YEAASAMGLG YWRAMGLVIL PQALKMVIPG IVNTFIALFK
DTSLVIIIGL FDLLNSVKQA TADPAWLGMA TEGYVFAALV FWIFCFGMSR YSMHLEHKLD
TGHKR
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