| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1255 |
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| Symbol | |
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| ID | 1182891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1378253 |
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| End bp | 1379281 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392630 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_791085 |
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| Protein GI | 28868466 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGT TGAAATCCAC CCTGGCTATC GTCACCGCCT TGGCTGCATT TGGTGTGACC
GGGGCTGCCA ACGCAGGCGC CACCCTTGAC GCTATCGTCA AGAAAGGGTT TGTTCAGTGC
GGCGTCAGCG ATGGCCTGCC AGGGTTTTCC GTTCCAGACT CCACCGGCAA GATCACCGGT
ATCGATGCTG ACGTCTGCCG CGCAGTCGCC GCCGCAGTAT TTGGCGACGC CACCAAGGTC
AAGTTCAGCC AGTTGAACGC CAAAGAGCGT TTCACTGCAC TGCAATCGGG CGAGATCGAC
ATCCTTTCGC GTAACACCAC CTGGACCAGC TCCCGCGATT CGGCCATGGG CCTGATGTTT
GCCGGCGTGA CTTACTACGA CGGCATCGGC TTTCTGGTAA ACAAAAAACT GGGCGTCAAC
AGTGCCAAGG AACTGGACGG TGCAACTATC TGTATCCAGG CCGGTACCAC CACCGAGCTG
AACGTCTCCG ACTACTTCCG CTCCAACAAC CTGAAATACA CGCCGATCAC TTTCGACACC
TCCGATGAAA GCGCCAAGTC GCTGGAAGGC GGCCGTTGCG ACGTGTTGAC TTCCGACCAG
TCGCAGCTCT ACGCACAGCG CAGCAAGCTG GCCAAACCGG ACGACTACGT CGTTCTGCCG
GAAGTGATCT CCAAAGAGCC TCTGGGCCCT GTCGTGCGCA AAAACGATCC GGAGTGGTTC
GCGATCGTCA AGTGGACCCT GTTCGCCATG CTCAACGCCG AGGAAGCCAA AATCACTTCC
AAGAACGTCG AAGCTGAAGC CAAGGCGACC AAAAACCCCG ACGTAGCCCG TATGCTCGGC
GCAGACGGTA CTTACGGCAA GGACCTGAAC CTGCCGAAGG ACTGGGTCGT GCAGATCGTC
AAGCAAGTCG GTAACTACGG CGAAGTGTTC GAACGCAACC TGGGCGAAGG CACCCCGCTG
AAAATCAAGC GTGGCCAGAA CGCTCTGTGG AATGCCGGCG GCATCCAGTA CGCACCACCT
ATTCGTTGA
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| Protein sequence | MKMLKSTLAI VTALAAFGVT GAANAGATLD AIVKKGFVQC GVSDGLPGFS VPDSTGKITG
IDADVCRAVA AAVFGDATKV KFSQLNAKER FTALQSGEID ILSRNTTWTS SRDSAMGLMF
AGVTYYDGIG FLVNKKLGVN SAKELDGATI CIQAGTTTEL NVSDYFRSNN LKYTPITFDT
SDESAKSLEG GRCDVLTSDQ SQLYAQRSKL AKPDDYVVLP EVISKEPLGP VVRKNDPEWF
AIVKWTLFAM LNAEEAKITS KNVEAEAKAT KNPDVARMLG ADGTYGKDLN LPKDWVVQIV
KQVGNYGEVF ERNLGEGTPL KIKRGQNALW NAGGIQYAPP IR
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