| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1253 |
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| Symbol | rhlB |
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| ID | 1182889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1375533 |
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| End bp | 1376726 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392628 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | NP_791083 |
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| Protein GI | 162533080 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCCAC AGGAAGGCAA GACCCGCTTC CATGACTTCA ACCTGGCCCC CGAACTGATG
CACGCGATTC AGGACCTTGG TTTTCCCTAT TGCACGCCGA TCCAGGCGGG TGTGCTGGGT
TTCACCCTCA AGGGCAAGGA CGCCATCGGC CGCGCCCAGA CAGGCACCGG CAAGACCGCT
GCGTTCCTGA TCTCGATCAT CGAGCAACTG ACCCAGACAC CGCCGCCGGC AGAGCGCTAC
ATGGGCGAAC CCCGCGCACT GATCATCGCG CCGACCCGCG AACTGGTGGT GCAGATCGCC
AAGGACGCCG CCGACCTGAC CAAATACACC AACCTCAACG TCATGACGTT TGTCGGTGGC
ATGGACTTCG ACAAACAGCT CAAGCAGCTT GAAGCGCGGC ACTGTGACAT TCTGGTCGCC
ACGCCGGGTC GCCTGCTGGA CTTCAACCAG CGCGGCGAAG TGCACCTGGA CATGGTAGAG
GTGATGGTGC TCGATGAAGC CGACCGCATG CTCGACATGG GCTTCATCCC GCAGGTCCGG
CAGATCATTC GCCAGACCCC GCACAAGGGC GAACGCCAGA CCCTGCTGTT CTCCGCGACC
TTCACCGAAG ACGTGATGAA CCTTGCCAAG CAGTGGACGA CCGATCCTTC CATCGTCGAG
ATCGAATCCT TGAATGTCGC CAGCGACAAC GTCGAACAGC ATATCTATGC CGTTGCCGGT
GCCGACAAAT ACAAGTTGCT CTACAACCTG GTCACCGACA ACGGCTGGGA ACGGGTCATG
GTCTTTGCCA ACCGCAAGGA TGAAGTGCGC CGCATCGAAG AGCGTCTGGT ACGCGATGGC
GTCAACGCCG CGCAACTGTC AGGCGATGTG CCGCAGCACA AGCGCATCAA GACCCTTGAA
GGTTTCCGCG AAGGCAAGAT CCGCGTACTG GTCGCCACCG ATGTGGCCGG TCGCGGGATT
CACATCGACG GCATCAGCCA CGTGATCAAC TTCACCCTGC CGGAAGTTCC GGACGACTAC
GTGCACCGCA TCGGCCGTAC CGGTCGCGCA GGGGCCGATG GCGTCTCGAT CAGCTTCGCC
GGGGAAGACG ACTCCTACCA GTTGCCCGCC ATCGAAGAGA AGCTGGGCCG CAAGATCAGC
TGTGAAACAC CGCCGACTCA TCTGCTCAGA GCAGTCGTGC GACAAACCAA CTGA
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| Protein sequence | MEPQEGKTRF HDFNLAPELM HAIQDLGFPY CTPIQAGVLG FTLKGKDAIG RAQTGTGKTA
AFLISIIEQL TQTPPPAERY MGEPRALIIA PTRELVVQIA KDAADLTKYT NLNVMTFVGG
MDFDKQLKQL EARHCDILVA TPGRLLDFNQ RGEVHLDMVE VMVLDEADRM LDMGFIPQVR
QIIRQTPHKG ERQTLLFSAT FTEDVMNLAK QWTTDPSIVE IESLNVASDN VEQHIYAVAG
ADKYKLLYNL VTDNGWERVM VFANRKDEVR RIEERLVRDG VNAAQLSGDV PQHKRIKTLE
GFREGKIRVL VATDVAGRGI HIDGISHVIN FTLPEVPDDY VHRIGRTGRA GADGVSISFA
GEDDSYQLPA IEEKLGRKIS CETPPTHLLR AVVRQTN
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