| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1244 |
|---|
| Symbol | |
|---|
| ID | 1182880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1368333 |
|---|
| End bp | 1369112 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637392619 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791074 |
|---|
| Protein GI | 28868455 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGG TGATTTCCCC AGCGAAAACC CTCGATTTCG AGACGCCGCC CACCACCGCG
CGCTTCACCC GGCCCCAGTA CCTGGATCAC TCCCAGGAAC TGATCACCCA GTTGCGGGAG
CTGACCCCGG CGCAGATCAG CGAGCTGATG CACCTTTCCG ATAAACTGGC CGGGCTCAAT
GCCGCGCGCT TCGGCAGTTG GGACCCGGCG TTCACGCTCG ACAATGCCAA GCAGGCATTA
CTGGCGTTCA AGGGCGATGT CTACACCGGC CTGCAAGCAG AAACCCTCAG CGACGCACAA
CTCGACTACG CCCAGGACCA TTTGCGCATG CTGTCCGGCC TCTACGGGCT GTTGCGCCCG
CTGGACCTGA TGCAACCTTA TCGCCTGGAA ATGGGCACCC GACTGGCCAA CGCCCGCGGC
AAGGACCTTT ATGCGTTCTG GGGCACCCGA ATCAGCGAAT GGCTGAACGA GGCGCTAGCC
GATCAGGGCG ATGACCTGCT GCTCAACCTT GCCTCTACCG AGTACTTCTC GGCCGTCAAA
CGTTCGGCGC TCAAGGCGCG AATCATCGAC ACCGAGTTCA AGGACTTGAA AAACGGGCAC
TACAAGATCA TCAGCTTCTA TGCGAAAAAG GCACGCGGCA TGATGAGCCG CTTCGTCATC
GAAGAGCGCA TCAACAGTCC CGAAGCGTTA AAGCAGTTCG ATGTACAGGG CTACCGTTAC
AACAGCGAGC AGTCAACGCC TGACAAGTTA GTGTTTCTGC GTAACTCAGC TGAAGATTGA
|
|---|
| Protein sequence | MLMVISPAKT LDFETPPTTA RFTRPQYLDH SQELITQLRE LTPAQISELM HLSDKLAGLN
AARFGSWDPA FTLDNAKQAL LAFKGDVYTG LQAETLSDAQ LDYAQDHLRM LSGLYGLLRP
LDLMQPYRLE MGTRLANARG KDLYAFWGTR ISEWLNEALA DQGDDLLLNL ASTEYFSAVK
RSALKARIID TEFKDLKNGH YKIISFYAKK ARGMMSRFVI EERINSPEAL KQFDVQGYRY
NSEQSTPDKL VFLRNSAED
|
|---|
| |