| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1236 |
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| Symbol | algL |
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| ID | 1182872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1356280 |
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| End bp | 1357416 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392611 |
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| Product | alginate lyase |
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| Protein accession | NP_791066 |
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| Protein GI | 28868447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACTC CGAAACTGAT ACGCCCTACC CTGCTGTCGA TGGCAATAGT GTCATCGATG
GCCTGGGCTA CGGGTGCGTC CGCCGCACTG GTTCCACCCA AGGGCTATGA TGCCCCGATC
GAAAAGATGA AGACCGGCGA TCACAATTTC ACCTGTGAAG CCATTCCCAA GCCTTACACC
GACAAGCTGG TTTTCCGCAG CAAGTACGAA GGTTCGGACA AGGCGCGCGC GACACTCAAT
GCAGTGTCCG AAGAAGCTTT TCGTGACGCG ACCAAGGACA TCACCACCCT TGAGCGTGGC
GTCAGCAAAG TCGTCATGCA GTACATGCGT GACGGTCGCC CGGAACAGCT CGATTGCGCG
CTGAACATGA TGACCACGTG GGCAAAAGCC GATGCGCTGG AATCCCGCGA GTTCAACCAC
ACCGGCAAGT CCATGCGCAA ATGGGCACTG GGCAGCATGT CCTCTGCTTA CCTGCGCTTG
AAGTTCTCCG ATTCGCACCC GTTGGCCAAT CGCCAGCAGG ACGCGCAGAT CATCGAGGCC
TGGTTCAGCA AGCTGGCCGA TCAGGTGGTC AGCGACTGGA GCAATCTGCC GCTGGAAAAA
ATCAATAACC ACTCGTACTG GGCTGCGTGG TCGGTGATGT CCACCGCTGT CGTGACCAAC
CGCAAGGACC TGTTCGATTG GGCGGTGAAG GAATTCAAGG TCGCCGCCAA TCAGGTGGAC
AAGGACGGCT ACCTGCCTAA CGAGATGAAG CGCCGTCAAC GTGCGCTGTC GTATCACAAC
TACGCCCTGC CGCCGCTCGC GATGATCGCA AGCTTCGCTC AGGCCAACGG TGTTGATCTG
CGTCCGGAAA ACAATGGTGC GTTGAAGCGT CTGGGTGACC GTGTGCTGGC CGGCGTCAAA
GACCCTGCAT CGTTTGCGGA ACACAACGGT GAAAAACAGG ACATGACGGA CCTCAAGAAA
GATCCGAAAT TTGCCTGGCT CGAACCGTAC TGCTCGCTCT ACACCTGCAG CCCGGACGTG
CTGGAAGATA AACACGAAAA GCAGCCGTTC AAAACCTTCC GCCTGGGCGG TGACCTGACC
AAGGTCTACG ACCCGACCCA TGAAAAAGGC GACAAGGGCG ACAACGACGG CTCCTGA
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| Protein sequence | MQTPKLIRPT LLSMAIVSSM AWATGASAAL VPPKGYDAPI EKMKTGDHNF TCEAIPKPYT
DKLVFRSKYE GSDKARATLN AVSEEAFRDA TKDITTLERG VSKVVMQYMR DGRPEQLDCA
LNMMTTWAKA DALESREFNH TGKSMRKWAL GSMSSAYLRL KFSDSHPLAN RQQDAQIIEA
WFSKLADQVV SDWSNLPLEK INNHSYWAAW SVMSTAVVTN RKDLFDWAVK EFKVAANQVD
KDGYLPNEMK RRQRALSYHN YALPPLAMIA SFAQANGVDL RPENNGALKR LGDRVLAGVK
DPASFAEHNG EKQDMTDLKK DPKFAWLEPY CSLYTCSPDV LEDKHEKQPF KTFRLGGDLT
KVYDPTHEKG DKGDNDGS
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