| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1203 |
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| Symbol | |
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| ID | 1182839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1316530 |
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| End bp | 1317072 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392580 |
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| Product | RNA polymerase sigma-70 family protein |
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| Protein accession | NP_791035 |
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| Protein GI | 28868416 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCGACT TTTCCGCCGT TGATGATGAC GCCAGTCGTC GCCAACAAAT GACCGAGCTC
TACGTCGACC ACCACTCGTG GTTGCAGAAC TGGCTGCGGA AAAAACTGGG CTGCTCGCAG
CGTGCAGCCG ATCTTGCTCA TGATGCTTTC GTTCGAATTC TTACCCTGAC CGAGCCGCTC
AACCTCAAGG AACCGCGCGC TTTTCTGTCG ACCACGGCCA CCCGTCTGCT GATTGACGGT
GCCCGCCGCC GCAAGGTCGA ACGCGCTTAT CTGGATGCGT TGGCGCTGCA TGCCGACGAG
GCGAGCATTC CCAGCCCTGA AGCCATTCAC GCCGCGCTGC AGATACTCGA GCGAATCGCC
CGGTTGCTTG AAGGTCTGCC CGAAAAACCG CGGCAGGCCT TCTTGCTCCA CCGTCTCGAT
GGTCTGACGT ACAGCGAAAT CGCCACTCAT TTGGGGGTGT CCTCCAGCAT GGTCAAACAG
TACATGGCCA GCGTCATGGT GCATTGCTAC AAGGCACTGC ATGGTTCGGG CCATTTTGCA
TGA
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| Protein sequence | MRDFSAVDDD ASRRQQMTEL YVDHHSWLQN WLRKKLGCSQ RAADLAHDAF VRILTLTEPL
NLKEPRAFLS TTATRLLIDG ARRRKVERAY LDALALHADE ASIPSPEAIH AALQILERIA
RLLEGLPEKP RQAFLLHRLD GLTYSEIATH LGVSSSMVKQ YMASVMVHCY KALHGSGHFA
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