Gene PSPTO_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1200 
Symbol 
ID1182836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1314899 
End bp1315387 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content57% 
IMG OID637392577 
Producthypothetical protein 
Protein accessionNP_791032 
Protein GI28868413 
COG category[S] Function unknown 
COG ID[COG3223] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAACA AATGGGCAGT AAAGATAAGG CATCGCGTGC ATGCGCAGGC CGAATCACTG 
GGCAACCTCT GCGTCGAGAG CTTCCACTTT CTTGCGCTGT TCGCCATCGG CGCAATCACC
GCCTGGGCGT CAGTGGTCGC ATTCATGGGC ATGGTCGAGA AGGGCAACGT AACCGTCGAT
GACATTCTGT TGCTGTTTAT TTACCTGGAA CTGGGGGCGA TGACGGGGAT TTATTTCAAG
ACCAACCACA TGCCCGTGCG CTTTTTGATC TACGTCGCGA TCACGGCCCT GACTCGCCTG
CTGATTTCCG ACGTGTCCCA CCACAACCCG CCGGACATCG GCATTGTCTA CCTGTGTGGC
GGCATTCTGT TGCTGGCGTT CGCGATTCTG GTGGTGCGCT ACGCGTCGTA CAAATACCCG
TCGGCGAAGA TTCCCGATTC ATCCAGCGCG GTCAAAGGCG CGGTGACCGA GGAGAAAGGC
GAGGTCTGA
 
Protein sequence
MGNKWAVKIR HRVHAQAESL GNLCVESFHF LALFAIGAIT AWASVVAFMG MVEKGNVTVD 
DILLLFIYLE LGAMTGIYFK TNHMPVRFLI YVAITALTRL LISDVSHHNP PDIGIVYLCG
GILLLAFAIL VVRYASYKYP SAKIPDSSSA VKGAVTEEKG EV