Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1200 |
Symbol | |
ID | 1182836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1314899 |
End bp | 1315387 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637392577 |
Product | hypothetical protein |
Protein accession | NP_791032 |
Protein GI | 28868413 |
COG category | [S] Function unknown |
COG ID | [COG3223] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAACA AATGGGCAGT AAAGATAAGG CATCGCGTGC ATGCGCAGGC CGAATCACTG GGCAACCTCT GCGTCGAGAG CTTCCACTTT CTTGCGCTGT TCGCCATCGG CGCAATCACC GCCTGGGCGT CAGTGGTCGC ATTCATGGGC ATGGTCGAGA AGGGCAACGT AACCGTCGAT GACATTCTGT TGCTGTTTAT TTACCTGGAA CTGGGGGCGA TGACGGGGAT TTATTTCAAG ACCAACCACA TGCCCGTGCG CTTTTTGATC TACGTCGCGA TCACGGCCCT GACTCGCCTG CTGATTTCCG ACGTGTCCCA CCACAACCCG CCGGACATCG GCATTGTCTA CCTGTGTGGC GGCATTCTGT TGCTGGCGTT CGCGATTCTG GTGGTGCGCT ACGCGTCGTA CAAATACCCG TCGGCGAAGA TTCCCGATTC ATCCAGCGCG GTCAAAGGCG CGGTGACCGA GGAGAAAGGC GAGGTCTGA
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Protein sequence | MGNKWAVKIR HRVHAQAESL GNLCVESFHF LALFAIGAIT AWASVVAFMG MVEKGNVTVD DILLLFIYLE LGAMTGIYFK TNHMPVRFLI YVAITALTRL LISDVSHHNP PDIGIVYLCG GILLLAFAIL VVRYASYKYP SAKIPDSSSA VKGAVTEEKG EV
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