| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1196 |
|---|
| Symbol | |
|---|
| ID | 1182832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1312251 |
|---|
| End bp | 1313501 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637392573 |
|---|
| Product | UDP-N-acetylglucosamine 2-epimerase |
|---|
| Protein accession | NP_791028 |
|---|
| Protein GI | 28868409 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
|---|
| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTC AACACCCCAG AATGAAGGTC CTTTCAATTT TCGGCACTCG TCCAGAAGCC
ATCAAGATGG CACCTCTGGT CAGAGCACTG GCCGCAGAGC CGGGTATCGA TTCGAGAATC
TGCATCACCG GGCAACACCA GAGCATGCTG CAACAGGTGC TGGACATGTT CGAGCTCAAG
GCTGATTACA GCCTCGACGT GATGCGCCCC GAGCAGACCC TGAACTCCCT GACGGCAGCG
CTTTACGCCG CCATCGACCC GATTCTGGAT GACATGAAGC CGGACAAGGT TCTGGTTCAC
GGTGACACCA CGTCGGCGAT GGTTGCGGCC ATGTCGGCGT TTCACAGGCG CATACCCATC
GGCCACGTCG AAGCGGGCCT GCGTACTGGC GACATCCGTC AGCCCTGGCC TGAAGAGATG
AACCGTCGTT GCATCGACCT GATCTCCGAT CACCTGTTTG CACCCACTGC CGAGTCCCGC
CGCAACGTGC TGGGCGAACG CCTGCAAGGT GTGTCGTTTG TGACCGGCAA CACCGTGATC
GACGCGCTGC AACTGACCGC TCAGCGAATC GACAGCAACC GCCAGTTGCG CCACGCACTT
GATCGCCAGT TCTCGTTTCT GGTGCCTGAG CGCAAGGTTC TGGTGGTCAC AGGGCATCGT
CGCGAGAATT TCGGCGATGG CTTCCTGAAT ATCTGCAAGG CGCTGGCCGA GCTGGCCAAA
CGCGACGATA TGCAAATTGT CTATCCGGTA CACCTGAACC CCAATGTGCT GGGGCCGGTG
ACCGAGCACC TGGGCGAATT GCCCAACGTG CACCTGATCA AGCCGCTGGA CTACCTGTCG
TTCGTGCGCC TGATGCAACG TGCCCACGTC ATCCTCACCG ACTCCGGGGG CGTGCAGGAA
GAAGCGCCAT CGCTGGGCAA GCCGGTGCTG GTCATGCGTG ACGTTACCGA GCGTCCGGAA
GCCGTCGCAG CGGGCACCGT ACGCCTGGTG GGCACTGAGA CGGACGCAAT CATCAACGGC
GTGAACGCTC TGTTTGATGA CGAAATTCTC TGGCAGAACG CCTCCCGTTC GGCCAACCCT
TATGGCGACG GCAAAGCCAG TGCACGCATT GTCGATGCAC TGATGGGCCG CCCGGTGGAT
GAGTTTGTCG CCGAACTGCC GCGCCACCGA CCTGATTCGA TGGACGCGCA ACGCGACACC
CGAATCAAGC CTCAGCCGCA CCATTCCCGG ATGCGCTCGA TGGCCGGTTA A
|
|---|
| Protein sequence | MAGQHPRMKV LSIFGTRPEA IKMAPLVRAL AAEPGIDSRI CITGQHQSML QQVLDMFELK
ADYSLDVMRP EQTLNSLTAA LYAAIDPILD DMKPDKVLVH GDTTSAMVAA MSAFHRRIPI
GHVEAGLRTG DIRQPWPEEM NRRCIDLISD HLFAPTAESR RNVLGERLQG VSFVTGNTVI
DALQLTAQRI DSNRQLRHAL DRQFSFLVPE RKVLVVTGHR RENFGDGFLN ICKALAELAK
RDDMQIVYPV HLNPNVLGPV TEHLGELPNV HLIKPLDYLS FVRLMQRAHV ILTDSGGVQE
EAPSLGKPVL VMRDVTERPE AVAAGTVRLV GTETDAIING VNALFDDEIL WQNASRSANP
YGDGKASARI VDALMGRPVD EFVAELPRHR PDSMDAQRDT RIKPQPHHSR MRSMAG
|
|---|
| |