| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1187 |
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| Symbol | |
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| ID | 1182823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1298852 |
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| End bp | 1299772 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392564 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_791019 |
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| Protein GI | 28868400 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.49232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGT CAGTACGTTT TGAAGATAAA GTCGTGATTG TGACGGGCGC AGGCGGCGGG
CTTGGACGAG CCCACGCGCT GCTCTTCGCG AAACATGGCG CGCGGGTGGT GGTTAACGAT
CTGGGTGGTT CGGCGCAGGG CGAAGGGGCC AGTGCCTCTG CTGCCGATCA GGTTGTCGCC
GAGATTCGCG AGGCGGGCGG CACCGCTGTG GCCAACCATG ACTCGGTGAC CGATGGCGGG
CGAATCGTGC AACACGCGCT TGACGCCTTC GGTCGCATCG ATGTGGTGGT CAACAACGCT
GGCATCCTGC GCGACAAGAC CTTCGCCAAA ATGCAGGATG CCGACTGGGA CCTCGTCTAT
CGCGTTCATA TAGAGGGCGC CTACAAGGTG ACCCATGCCG CCTGGCCGCA CCTGCGTGAG
CAGAATTACG GACGGGTGAT CTTCACCTCA TCGACCTCCG CCATCTATGG CAACTTCGGC
CAGTCCAATT ACGCAGCGGC CAAGCTCGGG CTTTACGGAC TGACTCGCAC CCTTGCACTG
GAAGGCCGCA AGAACGGAAT TTTGGTCAAC GCCATCGCGC CCACCGGCGG CACACGAATG
ACCGAGGGCC TGATCCCTGC CAGCGTGTTC GAGCTGCTCA AACCTGAACT GGTCAGCCCG
CTGGTGGTGT ACCTGGGCAG TGAACAGTGC CAGGACAGCG GTGCGCTGTT TGAAGTAGGC
GGCGGATGGA TCGGCAAAGT CCGCTGGGAG CGCAGCCTGG GTGCGTGCTT CGATCCACAG
GCGGGCTTCA GCCCGGAAGA CGTCGCTGCG CAGTGGCAGA CGATTGGTGA TTTCGACGGC
GCGGCGCACC CTGCTGACAG TACCGAGGCG CTGAAGGAAA TGATGGCCAA TCTGCAGGGG
TATCTCAGAG AAGTACATTA A
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| Protein sequence | MNESVRFEDK VVIVTGAGGG LGRAHALLFA KHGARVVVND LGGSAQGEGA SASAADQVVA
EIREAGGTAV ANHDSVTDGG RIVQHALDAF GRIDVVVNNA GILRDKTFAK MQDADWDLVY
RVHIEGAYKV THAAWPHLRE QNYGRVIFTS STSAIYGNFG QSNYAAAKLG LYGLTRTLAL
EGRKNGILVN AIAPTGGTRM TEGLIPASVF ELLKPELVSP LVVYLGSEQC QDSGALFEVG
GGWIGKVRWE RSLGACFDPQ AGFSPEDVAA QWQTIGDFDG AAHPADSTEA LKEMMANLQG
YLREVH
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