| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1184 |
|---|
| Symbol | |
|---|
| ID | 1182820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1296770 |
|---|
| End bp | 1297342 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637392561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791016 |
|---|
| Protein GI | 28868397 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3224] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCT CACCCGTCAC CCTGATGGTT GCCCGCCGCG TGGCGCAGGG TCGCTACCAT
GAAATGATGG CCTGGCTGCA CGAAGGCGAA CTGTTGGCCA CGGACTTTAC GGGTTATCTG
GGCTCAGGCG TGCTGGCTCC CCCACCCGGG GACGATGAAT TCCAGATTAT TTTCCGCTTT
GCCGACGAGT ACACCATGCA CGCCTGGGAG CATTCTGCCT CCCGACGCTC CTGGCTGGTG
CGCGGCAGCG GTCTATTCGC GCAACCCTCC GAGCATCGTG TCAGTGGCAT AGACGGCTGG
TTCGGCGCAA TCGATCAGCG CCCGCCGCGC TGGAAGCAGG CTGTGGCCAT CTGGCTGGCG
TTCTTTCCGG TGTCACTGAT TTTCAACTTT CTGCTCGGCC CGCTGCTCAA CCCTCTGGAT
CTGCTGCCGC GGATCATGAT CAGCACAGCG GTGCTGACCC CGTTGATGGT CTACCTGTTC
ATTCCGCTGT CCACGCGCCT GCTGGCCACC TGGCTGCAGA GCACGCCTGC AACGCCTCCT
GCACGACCGA CACAGTCGAC ATCCCCGCGA TAG
|
|---|
| Protein sequence | MSTSPVTLMV ARRVAQGRYH EMMAWLHEGE LLATDFTGYL GSGVLAPPPG DDEFQIIFRF
ADEYTMHAWE HSASRRSWLV RGSGLFAQPS EHRVSGIDGW FGAIDQRPPR WKQAVAIWLA
FFPVSLIFNF LLGPLLNPLD LLPRIMISTA VLTPLMVYLF IPLSTRLLAT WLQSTPATPP
ARPTQSTSPR
|
|---|
| |