Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1171 |
Symbol | |
ID | 1182807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1286390 |
End bp | 1286875 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392548 |
Product | peptidyl-prolyl cis-trans isomerase, FKBP-type |
Protein accession | NP_791003 |
Protein GI | 28868384 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATCG CCGCCAATAA GGCTGTCTCC ATTGACTATA CCCTGACCAA CGACGCTGGT GAGGTCATCG ACAGCTCTGC CGGTGGTGCG CCGCTGGTTT ACCTGCAAGG TGCAGGCAAC ATCATTCCGG GCCTGGAAAA AGCTCTGGAA GGCAAGGAAA TCGGCGACGA GCTCAAAGTT GCCGTCGAGC CGGAAGACGC CTACGGTGAA TACTCGGCCG AGTTGGTCAG CACCCTGAGC GCCAGCATGT TCGAAGGTGT CGACAAGCTT GAAGTCGGCA TGCAGTTCCA CGCTTCGGGT CCGGACGGCG GCATGCAGAT CGTGACCATC CGCGATCTGG ATGGCGATGA CGTGACTGTT GACGGCAACC ACCCGCTCGC AGGTCAGCGC CTGAACTTCG ACGTGAAAGT TGTGGCTATT CGCGACGCCA GTGAAGAAGA AATGGCTCAC GGCCATGTTC ACGGTGAAGG CGGTCATCAA CACTGA
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Protein sequence | MPIAANKAVS IDYTLTNDAG EVIDSSAGGA PLVYLQGAGN IIPGLEKALE GKEIGDELKV AVEPEDAYGE YSAELVSTLS ASMFEGVDKL EVGMQFHASG PDGGMQIVTI RDLDGDDVTV DGNHPLAGQR LNFDVKVVAI RDASEEEMAH GHVHGEGGHQ H
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