Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1168 |
Symbol | |
ID | 1182804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1282914 |
End bp | 1283837 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392545 |
Product | acyltransferase family protein |
Protein accession | NP_791000 |
Protein GI | 28868381 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.118723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCC TGCCTGCCCC ATTGCGCGGC GTCATTGCCT CGCTGCTGTT GGCGCTTAAC ACCATCGTCT GTTGCACGGT GCTGTTCGCG GTCACCCTCC TCAAGATCTG CCTGCCCTTT TCCGCCGCCC AACGTTTCAC CGACTGGCTG ATGAGCCATA TCCATGAAAC CTGGATCGGC ACCAACAACG CCTGGATCAG GCTGCTGTGC CACACCCGTT GGCAGTTGAG CGGGCTGGAG GGGCTCGATT ACAAACATTC GTACCTGGTC ACCAGTAACC ATCAGAGCTG GGTCGACATC ATGGTGCTGC AATACGTGCT CAACCGGCGC ATTCGTCCGC TGAAATTCTT CCTCAAGCAG GAGCTGATCT GGGTCCCGGT GATTGGTCTG GCGTGGTGGG CCTTGGGCTT TCCGTTCATG AAGCGCTACT CCAAGGCCTA CCTGGCGAAA CACCCGGAAA AGAAAGGCAA GGACCTGGAA ACCACCCGCC GCACCTGCGC AAAATTTCGC CACAACCCAG TGGGAATTTT CAATTTCGCA GAGGGCACAC GCTTCACCGC CGGCAAGCAT GCGCAACAGC AGTCGCCCTT TCGCCACCTG CTCAAACCCA AGGCGGGCGG CATCGCCTTC GTGCTGGACG CGATGGGCGA ACAGCTGGAG TCGATCATCA ACGTGACCAT CCACTATCCG GGCGGGCAAC CTGGTTACTG GGACCTGCTG TGCGGCAACG TGACGGACGT GGTCGCCCAC TTTGAAGAGA TCAGAATCCC ACCGCAATTC CTCGGCAAGA ACTACGACCA GGACGGCGAA TACCGCCTGG AATTCCAGCA GTGGATCAAT GCGTTATGGG AAGAGAAAGA CAGCCTGCTG GACAGACTGC ATGAGCAGTA TCCGGCGCAG CGGGGCAAGC GTGACGCACG ATAA
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Protein sequence | MDFLPAPLRG VIASLLLALN TIVCCTVLFA VTLLKICLPF SAAQRFTDWL MSHIHETWIG TNNAWIRLLC HTRWQLSGLE GLDYKHSYLV TSNHQSWVDI MVLQYVLNRR IRPLKFFLKQ ELIWVPVIGL AWWALGFPFM KRYSKAYLAK HPEKKGKDLE TTRRTCAKFR HNPVGIFNFA EGTRFTAGKH AQQQSPFRHL LKPKAGGIAF VLDAMGEQLE SIINVTIHYP GGQPGYWDLL CGNVTDVVAH FEEIRIPPQF LGKNYDQDGE YRLEFQQWIN ALWEEKDSLL DRLHEQYPAQ RGKRDAR
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