Gene PSPTO_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1168 
Symbol 
ID1182804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1282914 
End bp1283837 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID637392545 
Productacyltransferase family protein 
Protein accessionNP_791000 
Protein GI28868381 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.118723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCC TGCCTGCCCC ATTGCGCGGC GTCATTGCCT CGCTGCTGTT GGCGCTTAAC 
ACCATCGTCT GTTGCACGGT GCTGTTCGCG GTCACCCTCC TCAAGATCTG CCTGCCCTTT
TCCGCCGCCC AACGTTTCAC CGACTGGCTG ATGAGCCATA TCCATGAAAC CTGGATCGGC
ACCAACAACG CCTGGATCAG GCTGCTGTGC CACACCCGTT GGCAGTTGAG CGGGCTGGAG
GGGCTCGATT ACAAACATTC GTACCTGGTC ACCAGTAACC ATCAGAGCTG GGTCGACATC
ATGGTGCTGC AATACGTGCT CAACCGGCGC ATTCGTCCGC TGAAATTCTT CCTCAAGCAG
GAGCTGATCT GGGTCCCGGT GATTGGTCTG GCGTGGTGGG CCTTGGGCTT TCCGTTCATG
AAGCGCTACT CCAAGGCCTA CCTGGCGAAA CACCCGGAAA AGAAAGGCAA GGACCTGGAA
ACCACCCGCC GCACCTGCGC AAAATTTCGC CACAACCCAG TGGGAATTTT CAATTTCGCA
GAGGGCACAC GCTTCACCGC CGGCAAGCAT GCGCAACAGC AGTCGCCCTT TCGCCACCTG
CTCAAACCCA AGGCGGGCGG CATCGCCTTC GTGCTGGACG CGATGGGCGA ACAGCTGGAG
TCGATCATCA ACGTGACCAT CCACTATCCG GGCGGGCAAC CTGGTTACTG GGACCTGCTG
TGCGGCAACG TGACGGACGT GGTCGCCCAC TTTGAAGAGA TCAGAATCCC ACCGCAATTC
CTCGGCAAGA ACTACGACCA GGACGGCGAA TACCGCCTGG AATTCCAGCA GTGGATCAAT
GCGTTATGGG AAGAGAAAGA CAGCCTGCTG GACAGACTGC ATGAGCAGTA TCCGGCGCAG
CGGGGCAAGC GTGACGCACG ATAA
 
Protein sequence
MDFLPAPLRG VIASLLLALN TIVCCTVLFA VTLLKICLPF SAAQRFTDWL MSHIHETWIG 
TNNAWIRLLC HTRWQLSGLE GLDYKHSYLV TSNHQSWVDI MVLQYVLNRR IRPLKFFLKQ
ELIWVPVIGL AWWALGFPFM KRYSKAYLAK HPEKKGKDLE TTRRTCAKFR HNPVGIFNFA
EGTRFTAGKH AQQQSPFRHL LKPKAGGIAF VLDAMGEQLE SIINVTIHYP GGQPGYWDLL
CGNVTDVVAH FEEIRIPPQF LGKNYDQDGE YRLEFQQWIN ALWEEKDSLL DRLHEQYPAQ
RGKRDAR