| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1164 |
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| Symbol | |
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| ID | 1182800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1277310 |
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| End bp | 1277999 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392541 |
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| Product | ompA family protein |
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| Protein accession | NP_790996 |
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| Protein GI | 28868377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.867796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTACCT CGCGTCGTTT GATCATTGTT GCCACTGCCG TCGCCTTGCT TTCCGGCTGT
GCGACCTCCA ATCCGTATGA CAATCAAGGC CAGGCGCAAA GCTCCGGTGG CATGAGCAAA
ACGGCCAAAT ACGGCGGGCT CGGCGCTCTG GCCGGTGCGG TAGCCGGTGC GGCTATCGAC
CATAACAACC GTGGCAAAGG CGCACTGATC GGCGCAGCCG TTGCGGGCGC TGCGTCGGCA
GGTTATGGCT ACTACGCTGA CAAACAGGAA GCCGCGCTGC GCGCGAGCAT GGCCAACACC
GGCGTCGAAG TGCAGCGTCA GGGTGATCAG ATCAAGTTGA TCATGCCGGG CAATATCACC
TTCGCGACCG ATTCCTCAGC CATTGCCAGC AGCTTCTATT CGCCGCTGAA CAACCTGGCG
AACTCGCTCA AGCAGTTCAA CCAGAACAAC ATTGAAATCA TTGGCTACAC CGACAGCACC
GGCAGCCGTC AGCACAACAT GGATCTGTCG CAACAGCGTG CTCAAAGCGT AGCGACCTAC
CTGACTTCCC AGGGTGTCGA CCAATCTCAC CTGTCAGTCC GTGGCGCAGG CCCTGACCAG
CCTATCGCCA GCAACGCCGA CGCCAACGGC CGCGCCCAGA ATCGTCGCGT AGAGGTCAAC
CTCAAGCCGA TTCCGGGCCA GCAGTACTGA
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| Protein sequence | MFTSRRLIIV ATAVALLSGC ATSNPYDNQG QAQSSGGMSK TAKYGGLGAL AGAVAGAAID
HNNRGKGALI GAAVAGAASA GYGYYADKQE AALRASMANT GVEVQRQGDQ IKLIMPGNIT
FATDSSAIAS SFYSPLNNLA NSLKQFNQNN IEIIGYTDST GSRQHNMDLS QQRAQSVATY
LTSQGVDQSH LSVRGAGPDQ PIASNADANG RAQNRRVEVN LKPIPGQQY
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