| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1150 |
|---|
| Symbol | |
|---|
| ID | 1182786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1261851 |
|---|
| End bp | 1263239 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637392529 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_790984 |
|---|
| Protein GI | 28868365 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTCA GGATGACGAT GAACATGAAA ATAACAAAAA GTCTGTTGCA GGCCGGTGTG
TTGGGCCTGT CGTTGCTGGC AACCGGTGTC ATGGCGGCAG TCTCCGCTTC CGACGCGGCA
AAGCTTGGGA CCACCCTGAC GCCGATGGGC GCGGAAAAGG CCGGCAATGC CGCCAATACC
ATTTCGGCCT GGAGCCCGAT GCCGAAAAAC GCCGGCGCGG TGGACAGCAA GGGCTTCCTT
GCCAACCCGT ACGCCAGCGA AAAGCCGTTG TTCATCATCA CGGCCGCCAA CGTGGAGCAG
TACAAGGACA AGCTGGCACC GGGCCAATAC GCGATGTTCA AGCGTTACCC GGACAGCTAC
CGGATTCCGG TCTACCCGAC CCATCGCGGC GCCACCGTGC CGGATAGCGT GTTTGCCGCC
ATCAAGAAAA ATGCCACGAC CTCCAAACTG GTCAGTGGCG GCAGCGGTCT GGAAAACTTC
GACACGGCCA TTCCATTCCC GATTCCGGCC AGCGGTGTGG AAGTCATCTG GAACCACATC
ACCCGTTATC GCGGCGGCAG CGTGAAACGT CTGGTCACTC AGGCCACGCC GCAGGCCAAC
GGCTCCTACA GCCTGGTGTA CTTCTCCGAC CAGTTTGTGT TTCGCGACAA ATTGCGGGAT
TTCGACCGGA AAAACCCGGG TAACATCCTG TTCTACTTCA AGCAGGAAGT GACGGCTCCG
GCACGCTTGG CGGGCGGTGT GTTGCTGGTG CACGAAACCC TGGATCAGGT CGCCGAACCG
CGCTCGGCAT GGCTGTACAA CGCCGGTCAG CGCCGGGTAC GACGCGCACC TCAGGTGTCG
TATGACGGCC CTGGTACCGC TTCGGATGGT CTGCGCACCT CCGATAACCT CGACATGTAC
AACGGCGCGC CGGATCGCTA TGACTGGAAA CTGATCGGCA AGCAGGAAAT GTACATCGCC
TCCAACAGCC ACAAGCTGGA CGACCCGACG CTCAAGTACG CCGACATCAT CAAGGCCGGT
CACATCAATC AGGACTTGAC CCGCTATGAG CTGCGCCGCG TCTGGCATGT CACTGCCACA
CTCAAGGAAG GCCAGCGCCA CATCTACGCC AAGCGCGACT TCTTCTTTGA CGAAGACACC
TGGCAGGCAG CCGTTATCGA CCACTACGAC GGGCGTGGTC AGCTGTGGCG TGTCGCCGAG
GCTCACTCGG AAAACTACTA CGACCAGCAA GTGCCGTGGT ATGCGATCGA AACCCTGTAT
GACCTGCAAT CGGGTCGCTA CGTGGCACTG GGCATGAAAA ACGAGGAAAA AAGAGCGTAC
GAGTTCGGTT TCACGGCCGG CGCCAGCGAC TTCACACCCA ACGCACTGCG TCAGGAAGGG
GTGCGTTGA
|
|---|
| Protein sequence | MVFRMTMNMK ITKSLLQAGV LGLSLLATGV MAAVSASDAA KLGTTLTPMG AEKAGNAANT
ISAWSPMPKN AGAVDSKGFL ANPYASEKPL FIITAANVEQ YKDKLAPGQY AMFKRYPDSY
RIPVYPTHRG ATVPDSVFAA IKKNATTSKL VSGGSGLENF DTAIPFPIPA SGVEVIWNHI
TRYRGGSVKR LVTQATPQAN GSYSLVYFSD QFVFRDKLRD FDRKNPGNIL FYFKQEVTAP
ARLAGGVLLV HETLDQVAEP RSAWLYNAGQ RRVRRAPQVS YDGPGTASDG LRTSDNLDMY
NGAPDRYDWK LIGKQEMYIA SNSHKLDDPT LKYADIIKAG HINQDLTRYE LRRVWHVTAT
LKEGQRHIYA KRDFFFDEDT WQAAVIDHYD GRGQLWRVAE AHSENYYDQQ VPWYAIETLY
DLQSGRYVAL GMKNEEKRAY EFGFTAGASD FTPNALRQEG VR
|
|---|
| |