Gene PSPTO_1149 details

Gene Information

• Locus tag: PSPTO_1149
• ID: 1182785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1259909
• End bp: 1261846
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637392528
• Product: hypothetical protein
• Protein accession: NP_790983
• Protein GI: 28868364

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCA CAACCCCATT CTGGCGTCGG GCCAAGCTGC CCCTGGCCGT CAGCCTCGCG 
TCTTCACTGG CCGGCCCGGC TTTTGGCGTG ACCTTCAACG TCGGTGAAAT CGAAGGCAGT 
TTCGACTCCT CGTTGTCGGT GGGCGCGAGC TGGTCGACCG AGAAAGCCAA CAAAAACCTG 
ATCGGGGCCA ACAATGGCGG GCGTGGGTTG TCGCAGACCT CTGATGACGG CCACTTGAAC 
TTCAAGCGTG GGGAGACGTT TTCGAAGATT TTCAAGGGCA TTCATGATCT GGAGCTCAAG 
TACGGCGATA CCGGTGTGTT TGTACGTGGC AAATACTGGT ACGACTTCGA ACTCAAGGAT 
GAAAACCGCG AGTTCAAGGA CATCAGCGAT TCGGGCCGTA AAGAGGGCGC CAAATCCTCC 
GGGTTCCAGT TGCTTGATGC CTTCGTCTAT CACAACTATT CGATCGCAGA TCAACCGGGC 
GCTGTGCGCT TCGGCAAGCA GGTCATCAGT TGGGGGGAAA GTACCTTTAT TCAGGGCGGC 
ATCAACAGCG TGAACCCGGT CGATGTCTCG GCCTTTCGGC GTCCAGGCTC GGAAATCAAG 
GAAGGCCTGA TTCCGGTCAA CATGTTCTAC CTGTCGCAAA GCCTGACCGA CAACCTGTCT 
GCCGAAGGCT TCTACCAGCT GGAATGGGAC CAGACGGTGG TCGACAACTG CGGCACCTTC 
TTCTCGCAGC CAGACGTGAT CGCCGACGGT TGCAACAATA ACCTTGCAGT ACTGCGCAGT 
CGCAGCGGCC TGAACAGTTC GCTGACAGCG GCCGGTTTGC CAGCGGGCGC GCGCGGGGCG 
GTGTTCAACT CGCTGTCGCA GCAGGGCGTG GTGTTCGGCA ACCCGGACGA GGGCGCTGTG 
GTGCGCCGTG GTCCTGATCG TGATGCGCGT GACAGCGGCC AGTTCGGGTT TGCCATGCGC 
TACAACTTCG AGCCGCTGGA CACCGAGTTC GGTGCCTACA TGATGAATTA CCACAGCCGC 
GCACCGGTTT TCAGCGGTCG CGGTGGTTCG GCGGCTTCGT TCAGCCCACA AGGGCTGGTT 
GGCTCGCTGG TTCGTAACGG CTTGCCGGCC GGCACCGCTG CAGCGTTGGC GCCGACCTTG 
CTGCCCGTCG TGGTGGCTGG CAACTCCAGT TATTACGTCG AATACCCCGA AGACATTCGC 
CTGTACGGTT TGAGCTTCTC GACCACATTG CCTACCGGCA CCGCCTGGAG CGGCGAGATC 
AGCTACCGTC CGAATGCGCC GGTTCAGGTC AACACCACCG ACATCCTGTA TTCAGGTATT 
TCGCCGCTCA ACCCCAACGT ATCGCTGCTG AGCGGGCGGC CGAACACTGA TCAGCCCGGT 
TATCGCCGCA AAGAAATCAC CCAGATGCAG ACCACGTTCA CCCAGTTCTT CGATCAGGTC 
ATGGGCGCCG AGCGTCTGAC CGTGGTGGGT GAAGTGGGCT GGACCCACGT CGGTGGTCTG 
GAAAGCACCT CGAAAATCCG TTACGGCCGC GACCCGGTGT ACGGTCCGGG TCCATTGCCA 
GGCGGTCAAT GCGCAACGCT GAACGCCGGC ACATTGACCG GTGCCGAGCA AAACAACCTG 
ACCCGCTATT GCGAAGACGA TGGCTTTACG ACGGCCAACT CCTGGGGTTA TCGCGCACGC 
GCCATCTGGG ATTACAACAG CGTGTTCGCC GGGGTCAACC TGCGTCCAAG CGTGGCCTGG 
TCGCATGACG TGAAGGGTTA TTCACCCGGC CCCGGCGGTA ACTTCGAAGA AGGCCGCAAA 
GCGGTCAGCC TGGGCCTGGA TGCCGAGTAC CAGAACACCT ACACCGCGAA CCTTTCCTAC 
ACCAACTTTT TTGACGGGAA ATACACCACG GTCGATGACC GGGACTTCGT GGCGCTCAGC 
TTCGGCATGA ACTTCTAA 

 

Protein sequence

MTTTTPFWRR AKLPLAVSLA SSLAGPAFGV TFNVGEIEGS FDSSLSVGAS WSTEKANKNL 
IGANNGGRGL SQTSDDGHLN FKRGETFSKI FKGIHDLELK YGDTGVFVRG KYWYDFELKD 
ENREFKDISD SGRKEGAKSS GFQLLDAFVY HNYSIADQPG AVRFGKQVIS WGESTFIQGG 
INSVNPVDVS AFRRPGSEIK EGLIPVNMFY LSQSLTDNLS AEGFYQLEWD QTVVDNCGTF 
FSQPDVIADG CNNNLAVLRS RSGLNSSLTA AGLPAGARGA VFNSLSQQGV VFGNPDEGAV 
VRRGPDRDAR DSGQFGFAMR YNFEPLDTEF GAYMMNYHSR APVFSGRGGS AASFSPQGLV 
GSLVRNGLPA GTAAALAPTL LPVVVAGNSS YYVEYPEDIR LYGLSFSTTL PTGTAWSGEI 
SYRPNAPVQV NTTDILYSGI SPLNPNVSLL SGRPNTDQPG YRRKEITQMQ TTFTQFFDQV 
MGAERLTVVG EVGWTHVGGL ESTSKIRYGR DPVYGPGPLP GGQCATLNAG TLTGAEQNNL 
TRYCEDDGFT TANSWGYRAR AIWDYNSVFA GVNLRPSVAW SHDVKGYSPG PGGNFEEGRK 
AVSLGLDAEY QNTYTANLSY TNFFDGKYTT VDDRDFVALS FGMNF