| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1146 |
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| Symbol | rsmC |
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| ID | 1182782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1255859 |
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| End bp | 1256857 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392525 |
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| Product | ribosomal RNA small subunit methyltransferase C |
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| Protein accession | NP_790980 |
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| Protein GI | 28868361 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCGC GCAGTGAAGT GTTACTCCGC CAACCCGAGC TGTTTCAGGG CTCGCTGTTG
CTGGTCGGGC TGCCTGCCGA TGACCTGCTC GGAAAACTGC CGAACGCGCG TGGTTGGTGC
TGGCATGCCG GTGATCAGGC CGCATTGGAT GCGCGGTTTG AAGGGCGCGT GGATTTCGGC
GTTGAAGCGC CAGAGGCCAC CTTTGAGGCC GCCGTGCTGT TCCTGCCCAA AGCCCGCGAC
CTGACTGATT ACCTGCTCAA TGCGCTGGCG TCCCGCCTTG CCGGGCGCGA GTTGTTTCTG
GTCGGCGAAA AACGTGGCGG GATCGAAGCC GCCGCCAAAC AACTGAGCCC GTTCGGCCGC
GCGCGCAAGC TCGACAGCGC CCGCCATTGC CAGCTCTGGC AGGTCACTGT CGAAAATGCC
CCGCAAGCCG TCACCCTGGA AAGCCTCGCC CGGCCTTATC AAATCGAACT GCAGGACGGC
CCGCTCACCG TCATCAGCCT GCCCGGCGTG TTCAGTCACG GGCGTCTGGA TCGCGGCTCG
GCGCTTCTGC TGGAAAACAT CGACAAGCTG CCCAGTGGCA ACCTGCTCGA CTTCGGTTGT
GGTGCCGGTG TGCTCGGCGC AGCGGTCAAA CGTCGCTACC CGCACAACGA CGTGGTGATG
CTGGATGTGG ATGCCTTTGC TACCGCAAGC TCGCGCCTGA CCCTGGCCGC CAATGGCCTG
GAAGCACAGG TTGTGACCGG TGACGGAATC GACGCCGCAC CGATGGGCCT GAACACCATT
CTGAGCAACC CGCCGTTCCA TGTCGGGGTT CACACCGACT ACATGGCAAC AGAGAACTTG
CTGAAAAAAG CACGCCAACA TCTGAAATCA GGCGGCGAAC TGCGCCTGGT GGCGAATAAC
TTTCTGCGTT ACCAGCCACT GATCGAAGAG CATGTGGGCT ACTGCCACGT CAAGGCTCAG
GGCAACGGTT TCAAAATCTA CAGCGCCAAA CGCTCTTGA
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| Protein sequence | MDPRSEVLLR QPELFQGSLL LVGLPADDLL GKLPNARGWC WHAGDQAALD ARFEGRVDFG
VEAPEATFEA AVLFLPKARD LTDYLLNALA SRLAGRELFL VGEKRGGIEA AAKQLSPFGR
ARKLDSARHC QLWQVTVENA PQAVTLESLA RPYQIELQDG PLTVISLPGV FSHGRLDRGS
ALLLENIDKL PSGNLLDFGC GAGVLGAAVK RRYPHNDVVM LDVDAFATAS SRLTLAANGL
EAQVVTGDGI DAAPMGLNTI LSNPPFHVGV HTDYMATENL LKKARQHLKS GGELRLVANN
FLRYQPLIEE HVGYCHVKAQ GNGFKIYSAK RS
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