Gene PSPTO_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1145 
Symbol 
ID1182781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1255028 
End bp1255612 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID637392524 
Producthypothetical protein 
Protein accessionNP_790979 
Protein GI28868360 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAT CATTCTTAGT CCCTACCGCA GTGGTTGCGC TCGCCGAAAT CGGTGACAAG 
ACGCAATTGC TCGCGCTCAT CCTCGCCGCA CGCTTTCGCA AGCCATGGCC GATCATCGCG 
GGCATCGTCG CCGCCACCCT GGCCAACCAT GCGGCAGCCG GCGCGGTAGG CGCCTGGTTC 
AGCACCTTCC TCTCTGACGC AGTGCTGCAC TGGATTCTCG CCGCCAGTTT CACGGCCACC 
GCGCTGTGGA CCCTGGTGCC AGACAAGATG GACGACGACG AGGCCAGCAC CGCGCGTAAA 
TTCGGCCCGT TCATGACCAC CCTGATCACC TTCTTCATCG CTGAAATCGG CGACAAGACG 
CAAATCGCCA CCGTTATGCT GGCGGCGCAG TATTCTCATC TGTGGCTGGT CATTATCGGT 
ACGACGCTGG GCATGCTGCT GGCCAACGTG CCGGTGGTGC TGGCAGGTAA TTTTGCCGCG 
GATAAATTGC CATTGACGCT GATCCGCCGT CTGGCAGCCT GCGCGTTTTT CGTACTGGCA 
TTGGTGGCGG TCTACAAGGC GATGCAGGTC AGCGGCTGGG TGTGA
 
Protein sequence
MLESFLVPTA VVALAEIGDK TQLLALILAA RFRKPWPIIA GIVAATLANH AAAGAVGAWF 
STFLSDAVLH WILAASFTAT ALWTLVPDKM DDDEASTARK FGPFMTTLIT FFIAEIGDKT 
QIATVMLAAQ YSHLWLVIIG TTLGMLLANV PVVLAGNFAA DKLPLTLIRR LAACAFFVLA 
LVAVYKAMQV SGWV