| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1144 |
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| Symbol | |
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| ID | 1182780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1254153 |
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| End bp | 1254971 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392523 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_790978 |
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| Protein GI | 28868359 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.599312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAGT CATTTGCCTT CTGTGCTTTG AGCGCCGCTT TGCTGCTCGG CGGGTGTCAG
GCAATCAATA CCACGAGTGG CGATTCTGTC GGTGTCGAGC GCAAGCAGTA TATGTTCAGC
ATGCTCTCCA CCGATGAAGT CAACAAAATG TACGCCCAGT CCTATCAGCA GACGGTCACT
GAAGCGACCA GCAAAGGCGT CCTGGACACC ACCAGTGCGA ACGCCAAACG TGTTCGTGCG
ATCGCTGATC GACTGATTGC CCAAGCCCCG AAACTGCGGC CTGACTCGGC CCAATGGCAG
TGGGAAGTCA ATCTGATCAA GAGTGACGAA CTGAACGCCA ATTGCGGCCC TGGCGGCAAG
ATTTTCGTTT ACAGCGGTCT GATCGACACC CTCAAACTGA CCGACGATGA ACTCGCTGCG
GTCATGGGCC ACGAGATCGC CCATGCCCTG CGCGAGCATG GTCGTGAAGC GATGTCCAAG
GCCTACGGTG TGTCCATGGC CAAGCAGGGT GCTGGCGCCT TGTTGGGTCT TGGGCAGGAC
AGCCTAGCGC TGGCCGATAC CGTCGTGAAT TACAGCCTGA CGCTGCCCAA CAGCCGCAGC
AATGAAAACG AAGCGGATTT GCTCGGTCTG GAACTGGCCG CCCGCGCCGG TTACAACCCT
AATGCAGCCA TTACCCTGTG GCAGAAAATG ACCCGGAATT CCGGTGGTTC GCAGCCCGAA
TTCATGAGCA CTCACCCTGC TTCGGAAAAT CGCATCTCCT CCTTGCAGGC TGCCATTCCA
AAAGTCATGC CGCTGTATCA GCAAGCCTCC AAATCCTGA
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| Protein sequence | MRQSFAFCAL SAALLLGGCQ AINTTSGDSV GVERKQYMFS MLSTDEVNKM YAQSYQQTVT
EATSKGVLDT TSANAKRVRA IADRLIAQAP KLRPDSAQWQ WEVNLIKSDE LNANCGPGGK
IFVYSGLIDT LKLTDDELAA VMGHEIAHAL REHGREAMSK AYGVSMAKQG AGALLGLGQD
SLALADTVVN YSLTLPNSRS NENEADLLGL ELAARAGYNP NAAITLWQKM TRNSGGSQPE
FMSTHPASEN RISSLQAAIP KVMPLYQQAS KS
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