Gene PSPTO_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1143 
Symbol 
ID1182779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1253340 
End bp1253969 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content63% 
IMG OID637392522 
Producthypothetical protein 
Protein accessionNP_790977 
Protein GI28868358 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.284928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAC GCTACGCCCT GTTTCGCTGG ACCCCTGCCT TTGCCGCCTT GCCCGGTTTT 
CCTGCCGATC AGCAGGCACA ATGGAATATT TCGCCAGCCG ACTGGGTATT GATCATGCGT 
GCCGCCGAAA ACAAGGACGG TATTGAACTG GTGCGCGCGC GCTGGGGGCT GACGCCGGCC 
TGGCTCACTG ATCTTTCGAA AACACCCGCC CATGCGCGAG CCGAAACGGT TGCTGAGCAA 
CCGATGTTTC GCGACGCGTT TGCGCACCGT CGCTGCCTGC TTCCGGCCAA TGGCTTTTAC 
GAGTGGCGTG GCAACCTGCG CAAACGCCCG TTCTGGTTGA CGCCGGGGGA GGGCGCCGCC 
CTGTTTTTTG CAGCCATATG GGAAGCGTAC CCGGTGCAGG GGCATACGTA CCTGAGCGTG 
GCGGTGGTCA CGCAGGCGGC AGCGACGCAA CGTCGCCCGC TGATTCTGGA TGCTCAGGGC 
CAGAAAGACT GGCTGGCGGC CGACACACCG CTTTCGACCC TGCAAGCCTT GCTGGCAGCG 
CCGCAGACAG CCCTGAGGGA GCGGCCGCTG GCCAATCTGG TCAACGACCC GAAACTCAAT 
GCGCCCGAGT GCCTGACCCC ATTGAGTTAG
 
Protein sequence
MCGRYALFRW TPAFAALPGF PADQQAQWNI SPADWVLIMR AAENKDGIEL VRARWGLTPA 
WLTDLSKTPA HARAETVAEQ PMFRDAFAHR RCLLPANGFY EWRGNLRKRP FWLTPGEGAA 
LFFAAIWEAY PVQGHTYLSV AVVTQAAATQ RRPLILDAQG QKDWLAADTP LSTLQALLAA 
PQTALRERPL ANLVNDPKLN APECLTPLS