| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1133 |
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| Symbol | |
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| ID | 1182769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1245042 |
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| End bp | 1245773 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392512 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_790967 |
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| Protein GI | 28868348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0659436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTGC TATTCGCCGG GTTCTTCCTG AGTTTCGATC TGAAGCTTGC GATCATTCTC
GACAAACTGC CCAATCTGAT CGGCCTGCAT CTGGCACCCA ACGGTTTCCT GCAAGGCGCG
GCGCTGACGC TGTTTGTGTC GGTGTGCTCG ATTGTGGTTT CAGTGCTGCT GGGTTTTGTC
ACCGCGCTGG CGAGGCTGTC CAGCAGCGCC GTAGCGTTTG GTATCGCCAG TTTTTATGCG
TCGTTTTTTC GCGGAACGCC GCTGCTGATC CAGATTCTGC TGATTTATCT CGGCTTGCCG
CAACTGGGCA TCGTGCCCGG CGCAATCGCG GCGGGGGTTA TTGCGCTGTC GCTCAACTAC
GGCGCCTACC TGAGCGAGAT CTTTCGGGCA GGCATCATCG GCGTTGCGGC CGGCCAGCGT
GAGGCAGCCT TGGCTCTGGC GCTGCGCCCG ACGCAGATCT TCTGGCGCGT CACCCTGCCC
CAGGCAATGC GCACGATTAT CCCGCCGACC ACCAACCAGT TCATCTCCAT GCTCAAGGAT
TCGTCACTGA TCTCGGTGAT GGGCGTCTGG GAAGTGATGT TCCTGGCACA GTCCTACGGC
CGCTCCAGCT ATCGATACAT CGAAATGCTG ACCACCGCAG CGGTGCTGTA CTGGATCATG
TCGATCGGTC TGGAGTTGTT GCAGTCGCGG CTGGAAAAAC ACTACGGCAA GGCGTATCAG
GCGCGCAAAT GA
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| Protein sequence | MFVLFAGFFL SFDLKLAIIL DKLPNLIGLH LAPNGFLQGA ALTLFVSVCS IVVSVLLGFV
TALARLSSSA VAFGIASFYA SFFRGTPLLI QILLIYLGLP QLGIVPGAIA AGVIALSLNY
GAYLSEIFRA GIIGVAAGQR EAALALALRP TQIFWRVTLP QAMRTIIPPT TNQFISMLKD
SSLISVMGVW EVMFLAQSYG RSSYRYIEML TTAAVLYWIM SIGLELLQSR LEKHYGKAYQ
ARK
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