| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1130 |
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| Symbol | upp |
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| ID | 1182766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1242541 |
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| End bp | 1243179 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392509 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | NP_790964 |
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| Protein GI | 28868345 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCATTC GTGAGATCCG TCATCCGCTG ATCCGCCACA AACTCGGCCT GATGCGCCGC
GCCGACATCA GCACCAAGAA TTTCCGTGAG CTGGCTCAGG AAGTCGGTGC CCTGCTGACG
TACGAAGCGA CCGCCGACCT CACTCTGGAA AGCTACGATA TTCAGGGCTG GGCTGGAACC
GTCTCGGTGG AGAAAATCGC CGGCAAGAAA ATCACTGTTG TCCCGATCCT GCGCGCCGGT
ATCGGCATGC TCGACGGCGT GCTCAGCCTG ATTCCGGGTG CCAAGGTCAG TGCCGTGGGC
GTCGCCCGCA ACGAAGAAAC CCTGCAGGCG CACACGTATC TGGAAAAACT GGTGCCGGAA
ATCGACGAGC GCCTGGCCAT GATCATCGAC CCGATGCTGG CCACTGGCAG CTCGATGGTC
GCGACCATCG ACCTGCTGAA AAAGGCCGGC TGCAAGGAAA TCCGCGCCAT GGTCCTGGTC
GCTGCACCGG AAGGTATTGC GGCAGTGGAA CGGGCGCACC CGGATGTGAT GATCTACACC
GCGTCCATCG ACGAGCGTCT GAACGAACAC GGCTACATCA TTCCGGGCCT GGGCGATGCC
GGTGACAAGA TTTTCGGCAC CAAGCAAAAG GACGCGTAA
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| Protein sequence | MPIREIRHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATADLTLE SYDIQGWAGT
VSVEKIAGKK ITVVPILRAG IGMLDGVLSL IPGAKVSAVG VARNEETLQA HTYLEKLVPE
IDERLAMIID PMLATGSSMV ATIDLLKKAG CKEIRAMVLV AAPEGIAAVE RAHPDVMIYT
ASIDERLNEH GYIIPGLGDA GDKIFGTKQK DA
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