Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1123 |
Symbol | |
ID | 1182759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1236463 |
End bp | 1237419 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392502 |
Product | hypothetical protein |
Protein accession | NP_790957 |
Protein GI | 28868338 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCAA TCGAAAAACC CAAACTCGGG ATCAGTGCGT GTCTGATGGG TGCCGAGGTT CGCTTCAATG GCGGGCATAA GGAGTCTCAT CTGTGCACGC AGGCGCTGAG CAAGTATTTC GATTTTGTTC AGGCGTGCCC CGAAGTCGCG ATCGGCTTGG GTATCCCGCG TGAGCCAATC AGGCTGGTGG GCGACGCCGA ACACCCCAAG GCGCTGGGCA CGGTCAATCG TGAGCTGGAT GTTACTCAGG CGCTGGCGGA TTACGGCATT CAGATGGCGG ACGAGCTGGG TGATATCTGC GGTTATATTT TCATGCAGAA GTCCCCGTCG TGCGGTCTGG AGCGGGTCAA GGTCTACCGT GAAAACGGCG CGCCGGTTGA CGGCGGTGGG CGCGGCATCT ACGCGCAGGC CTTTTGCGAG CGTCACCCTA ACCTGCCGGT CGAAGAAGAC GGGCGTCTGA ACGATGCCGT GCTGCGCGAA AACTTCGTGA CCCGTGTGTT TGCCTACGCG GCCTGGCAGC AATTGTTGAA AGACGGCATC ACCCGTCGAG CGTTGACCGA ATTTCACTCG CGCTACAAAT ACCAACTGAT GGCCAACGAC CCGGTGCAGT ACAAAGCGCT GGGCAAGATG CTGGGCAGCA TGGGCCGCAG CGACCCCAAT GAAATCGCCC CGCTGTATTT CAGCGAACTG ATGGCCGCCC TGAAAAAGTG CGCGACCCGG CGCACCCACA CCAACGTTCT GCAACATCTG TGCGGCTATC TGAAACAAAC CATCAGTGCC GAGGACAAGC AGGAAATTCA GGAAGTGATC GGCCAGTATC ATCAGGGCAT CGTGCCGCTG ATCGTACCGC TGACCCTGCT CAAGCATCAT TTTCGCCAAC ACCCGGATCC TTATGTAGCG CTGCAGGTGT ACATGCAGCC TCATCCGGAA AACCTCAGCC TGCGAAATGC GATTTGA
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Protein sequence | MPAIEKPKLG ISACLMGAEV RFNGGHKESH LCTQALSKYF DFVQACPEVA IGLGIPREPI RLVGDAEHPK ALGTVNRELD VTQALADYGI QMADELGDIC GYIFMQKSPS CGLERVKVYR ENGAPVDGGG RGIYAQAFCE RHPNLPVEED GRLNDAVLRE NFVTRVFAYA AWQQLLKDGI TRRALTEFHS RYKYQLMAND PVQYKALGKM LGSMGRSDPN EIAPLYFSEL MAALKKCATR RTHTNVLQHL CGYLKQTISA EDKQEIQEVI GQYHQGIVPL IVPLTLLKHH FRQHPDPYVA LQVYMQPHPE NLSLRNAI
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