Gene PSPTO_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1123 
Symbol 
ID1182759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1236463 
End bp1237419 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content58% 
IMG OID637392502 
Producthypothetical protein 
Protein accessionNP_790957 
Protein GI28868338 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCAA TCGAAAAACC CAAACTCGGG ATCAGTGCGT GTCTGATGGG TGCCGAGGTT 
CGCTTCAATG GCGGGCATAA GGAGTCTCAT CTGTGCACGC AGGCGCTGAG CAAGTATTTC
GATTTTGTTC AGGCGTGCCC CGAAGTCGCG ATCGGCTTGG GTATCCCGCG TGAGCCAATC
AGGCTGGTGG GCGACGCCGA ACACCCCAAG GCGCTGGGCA CGGTCAATCG TGAGCTGGAT
GTTACTCAGG CGCTGGCGGA TTACGGCATT CAGATGGCGG ACGAGCTGGG TGATATCTGC
GGTTATATTT TCATGCAGAA GTCCCCGTCG TGCGGTCTGG AGCGGGTCAA GGTCTACCGT
GAAAACGGCG CGCCGGTTGA CGGCGGTGGG CGCGGCATCT ACGCGCAGGC CTTTTGCGAG
CGTCACCCTA ACCTGCCGGT CGAAGAAGAC GGGCGTCTGA ACGATGCCGT GCTGCGCGAA
AACTTCGTGA CCCGTGTGTT TGCCTACGCG GCCTGGCAGC AATTGTTGAA AGACGGCATC
ACCCGTCGAG CGTTGACCGA ATTTCACTCG CGCTACAAAT ACCAACTGAT GGCCAACGAC
CCGGTGCAGT ACAAAGCGCT GGGCAAGATG CTGGGCAGCA TGGGCCGCAG CGACCCCAAT
GAAATCGCCC CGCTGTATTT CAGCGAACTG ATGGCCGCCC TGAAAAAGTG CGCGACCCGG
CGCACCCACA CCAACGTTCT GCAACATCTG TGCGGCTATC TGAAACAAAC CATCAGTGCC
GAGGACAAGC AGGAAATTCA GGAAGTGATC GGCCAGTATC ATCAGGGCAT CGTGCCGCTG
ATCGTACCGC TGACCCTGCT CAAGCATCAT TTTCGCCAAC ACCCGGATCC TTATGTAGCG
CTGCAGGTGT ACATGCAGCC TCATCCGGAA AACCTCAGCC TGCGAAATGC GATTTGA
 
Protein sequence
MPAIEKPKLG ISACLMGAEV RFNGGHKESH LCTQALSKYF DFVQACPEVA IGLGIPREPI 
RLVGDAEHPK ALGTVNRELD VTQALADYGI QMADELGDIC GYIFMQKSPS CGLERVKVYR
ENGAPVDGGG RGIYAQAFCE RHPNLPVEED GRLNDAVLRE NFVTRVFAYA AWQQLLKDGI
TRRALTEFHS RYKYQLMAND PVQYKALGKM LGSMGRSDPN EIAPLYFSEL MAALKKCATR
RTHTNVLQHL CGYLKQTISA EDKQEIQEVI GQYHQGIVPL IVPLTLLKHH FRQHPDPYVA
LQVYMQPHPE NLSLRNAI