| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1121 |
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| Symbol | phrB |
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| ID | 1182757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1234091 |
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| End bp | 1235539 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392500 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | NP_790955 |
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| Protein GI | 28868336 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA TCTGGCTGCG TAGTGACCTG CGCGTTCACG ATAATACCGC CCTGACGGCA
GCCATGCAGC GCGGCCCGAC GCTGGCGGTG TACCTGCTCA GCCCGACGCA GTGGCGCAAC
CACGACGACG CCGATTGCAA AGTGGACTTC TGGCTGCGCA ATCTGGTGGA GCTGGAAAAA
GCCCTTGGCA AACTGAACGT GCCGCTGCTG ATTCGCGAAG CCGATACCTG GGATCAGGCA
CCCGAGGTGC TGGCGACGCT GTGCAAACAG TTCAAGGTCG AGGGGCTGCA CCTTAATGAA
GAATACGGCA TCAACGAAAC CCGTCGTGAT CAGGCCGTGC AGCAGTCAAT GCAGGCGGAC
GGTGTTCACT TCACCAGCCA CCTTGATCAA TTGCTGTTCA AGCCGGGCAG TATCCTGACC
AAGACCGGCA ACTATTTCCA AGTGTTCACC CAGTTCAAGA AGGTCTGTTA CACCCGCCTG
CACCAAGCCA TGCCGCGGAC GGTGCACACG CCCGAAGCGC AGCAACCGCT GTCGATAAAA
AGTGACGCGA TCCCGGATCA GGTGAAGGGC TTTTCCACAC CGTCGAAAAC CCTGCGTGAC
CTGTGGCCCG CAGGTGAGGT CGAGGCAAGC CGCCGGATCG AAGCGTTCGC CGGCGAACAG
ATCAGTTACT ACAAAGACGA ACGCGACTTC CCGGCCAGGC CCGGCACCAG CCAGTTGTCG
GCCTATCTGG CGGCAGGCGT TATTTCGCCC CGTCAGTGCC TGCATGCCGC GCTGGCCAGC
AATCAGGGCG AATTTGAAAC CGGTGATGTC GGAACCGTGA CCTGGATCAA TGAGCTACTG
TGGAGAGAGT TCTATAAGCA CACGCTGGTA GGCTACCCGC GCGTTTCGCG TCACCGTGCA
TTTCGGCCGG AGACCGAAGC GCTGAAATGG CGCGACGCCC CCGAAGAACT GCTGGCGTGG
CAAGAAGCCC GCACCGGGCT GCCGATCATT GACGCGGCCA TGCGTCAGTT GCTGGAAACC
GGATGGATGC ACAATCGGCT AAGGATGGTC GTGGCGATGT TTCTCACTAA AAACCTGTTG
ATCGACTGGC GGGAAGGCGA GCGCTTTTTT ATGCGCCACC TGATCGACGG CGACCTGGCG
GCCAATAACG GCGGCTGGCA GTGGAGTTCG TCCACAGGCA CCGATTCGGC CCCCTACTTC
CGTATCTTCA ACCCACTGTC GCAATCGGAA CGATTCGACC CCGAAGGCGT GTTCATCAAA
CGCTGGCTGC CGGAGCTGGC TGACCTGAAC AAAAAACAGA TACACGATCC CGCTTCTGTC
GGCGGCCTGT TCGGCGTCGC CGATTACCCG AAGCCGATCG TCGACCTGAG CAAAAGCCGC
GCCCGCGCGC TGGCTGCCTT CAAGGCACTC CCGACTCGCC AACCCGCTGC GGGAGCTGAC
AATGGCTGA
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| Protein sequence | MQLIWLRSDL RVHDNTALTA AMQRGPTLAV YLLSPTQWRN HDDADCKVDF WLRNLVELEK
ALGKLNVPLL IREADTWDQA PEVLATLCKQ FKVEGLHLNE EYGINETRRD QAVQQSMQAD
GVHFTSHLDQ LLFKPGSILT KTGNYFQVFT QFKKVCYTRL HQAMPRTVHT PEAQQPLSIK
SDAIPDQVKG FSTPSKTLRD LWPAGEVEAS RRIEAFAGEQ ISYYKDERDF PARPGTSQLS
AYLAAGVISP RQCLHAALAS NQGEFETGDV GTVTWINELL WREFYKHTLV GYPRVSRHRA
FRPETEALKW RDAPEELLAW QEARTGLPII DAAMRQLLET GWMHNRLRMV VAMFLTKNLL
IDWREGERFF MRHLIDGDLA ANNGGWQWSS STGTDSAPYF RIFNPLSQSE RFDPEGVFIK
RWLPELADLN KKQIHDPASV GGLFGVADYP KPIVDLSKSR ARALAAFKAL PTRQPAAGAD
NG
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