Gene PSPTO_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1120 
Symbol 
ID1182756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1233676 
End bp1234098 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content58% 
IMG OID637392499 
Producthypothetical protein 
Protein accessionNP_790954 
Protein GI28868335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGT TCCTGCATCG CTTTGCGCAA GGCTTTGCGG CGCTGAACAA GGACAACCTT 
GATCAGGTCG CCGAGCTGTA CAGCGAAGAC GTGTCATTCA GTGACCCGAT GCACGATATC
CACGGCCTTG CCGCCATGCA GCGCTACTTC GCCGAGCTGT ACGCCAACGT GCGCGATCTG
CATTTCGACT TTCATGCCTT TGACGAGGTC CGGCCAGGTG AAGGCTATCT GGTCTGGACC
ATGAGCTACT CGCACCCGCG CCTGGCCGGT GGCCGGACGA TTCGTGTAGA GGGCTGTTCG
CACCTGAAAT GGCGCGACAA GGTTTACCGC CATCGGGACT ACTTCGATGC CGGTGCGTTG
CTCTACGAAC ACTTGCCCAT CATGGGTCGA GCCATCCACT GGCTGAAGAA GAGGTTAGGA
TGA
 
Protein sequence
MAEFLHRFAQ GFAALNKDNL DQVAELYSED VSFSDPMHDI HGLAAMQRYF AELYANVRDL 
HFDFHAFDEV RPGEGYLVWT MSYSHPRLAG GRTIRVEGCS HLKWRDKVYR HRDYFDAGAL
LYEHLPIMGR AIHWLKKRLG