| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1110 |
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| Symbol | hemK |
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| ID | 1182746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1225393 |
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| End bp | 1226226 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392489 |
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| Product | hemK protein |
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| Protein accession | NP_790944 |
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| Protein GI | 28868325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCA TCGCAAGCTT GTTAAGAAGC GCCGAGCTTC CCGATTCACC GACCGCGCGG
CTCGACATCG AGCTGTTGCT CGCGGCTGCC CTGGGTAAAC CGCGCAGTTT TCTGCACACC
TGGCCCGAGC GCATTGTCAG CACCGAAGCC GCCGTGGCCT TTGCGGGTTA CTTGCAGCGG
CGACGCACGG GCGAGCCGGT GGCTTACATT CTCGGTCAGC AAGGTTTCTG GAAGCTCGAT
CTGGAAGTTG CGCCGCACAC CTTGATCCCG CGCCCAGAGA CCGAAATGCT GGTCGAGGCG
GCACTGGAAC TGGTGCCGGC CTTTGCCCCG GCTCAGGTTC TGGACCTGGG CACCGGCACC
GGAGCGATCG CCCTGGCGCT GGCCAACGAC CGGCAGCAAT GGAAAGTGAC AGCGGTGGAC
CGCGTGCCCG AAGCGGTCGC GCTGGCCGAA CGCAACCGGC AGCGTCTGCA ACTGGATTAC
GCCCAGGTGC TCAACAGCCA CTGGTTCAGT GCGCTGGAAG GGCGGCAGTT TGATCTGATC
ATCAGTAACC CGCCGTACAT CGCCGACGCT GATCCGCATC TGTCGGCCGG TGACGTGCGT
TTCGAGCCGA GCAGTGCGTT GACGGCCGGT GCCGACGGGC TGGACGATTT GCGCACGATC
ATTGCCGACG CGCAGGCGCA CCTCAACGCC GATGGCTGGC TGCTGCTGGA GCACGGCTAC
GATCAAGGCC CGGCGGTGCG CGAACTGTTG ACTCGTCATG GTTTCGAGCG CATCCAGACC
CGCCGTGATC TGGGCGAACA CGAGCGCATC ACGTTCGGAT GCAAGCCGTG CTGA
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| Protein sequence | MTIIASLLRS AELPDSPTAR LDIELLLAAA LGKPRSFLHT WPERIVSTEA AVAFAGYLQR
RRTGEPVAYI LGQQGFWKLD LEVAPHTLIP RPETEMLVEA ALELVPAFAP AQVLDLGTGT
GAIALALAND RQQWKVTAVD RVPEAVALAE RNRQRLQLDY AQVLNSHWFS ALEGRQFDLI
ISNPPYIADA DPHLSAGDVR FEPSSALTAG ADGLDDLRTI IADAQAHLNA DGWLLLEHGY
DQGPAVRELL TRHGFERIQT RRDLGEHERI TFGCKPC
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