| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1105 |
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| Symbol | ispE |
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| ID | 1182741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1219609 |
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| End bp | 1220457 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392484 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | NP_790939 |
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| Protein GI | 28868320 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAAG CACAACTGGT GCTGCCCGCC CCGGCAAAAC TTAACCTGAT GCTGCACATT
CTGGGTCGCC GTCCTGACGG CTACCATGAA CTGCAAACCC TGTTTCAATT TCTCGATTAC
GGCGACGAGC TCGGCTTTGC GCTTCGCCAA GACGGTGTTA TTCGCCTGCA GACCGACGTC
CCCGGCGTTG CGCATGACAG CAACCTGATC GTCAAAGCCG CCCGCGCCCT GCAAAAACAG
TCCGGCTGCA CCCTGGGCAT GGACATCTGG CTGGAAAAAC GCCTGCCCAT GGGTGGCGGT
ATCGGCGGTG GCAGCTCGGA TGCGGCAACC ACATTGCTGG GCCTCAATCA TTTGTGGCAG
TTGGGCTGGG ATGAAGATCG CCTCGCACAA CTGGGCCTCA CACTGGGTGC CGATGTACCG
GTTTTTGTCC GTGGACACGC CGCTTTTGCT GAGGGTGTCG GGGAAATTCT GACCCCCGTA
GACCCGGAAG AACCATGGTA TTTGGTGCTC GTGCCGCAAG TCGCTGTAAG TACAGCAGAA
ATTTTTTCAG ATCCGTTGTT GACACGCGAC ACTGCGCCCA TTAAAGTGCG CCCCGTTCCC
AAGGGAAACA GTCGAAATGA CTGTAAGGCG GCTGTAGAGA GGCGTTACCC AGAAGTACGT
AACGCTTTGA ATTTGTTAGG TAAATTTACC GAAGCAAAAT TAACCGGAAC TGGAAGTTGT
GTGTTTGGGG CCTTCCCAAA CAAAGCTGAA GCTGATAAAG TCTCGGCCCT TCTTACAGAG
ACCCTTACGG GGTTCGTAGC GAAAGGAAGT AACATTTCGA TGTTGCATCG CAAGCTGCAA
ATTCTGTAG
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| Protein sequence | MVEAQLVLPA PAKLNLMLHI LGRRPDGYHE LQTLFQFLDY GDELGFALRQ DGVIRLQTDV
PGVAHDSNLI VKAARALQKQ SGCTLGMDIW LEKRLPMGGG IGGGSSDAAT TLLGLNHLWQ
LGWDEDRLAQ LGLTLGADVP VFVRGHAAFA EGVGEILTPV DPEEPWYLVL VPQVAVSTAE
IFSDPLLTRD TAPIKVRPVP KGNSRNDCKA AVERRYPEVR NALNLLGKFT EAKLTGTGSC
VFGAFPNKAE ADKVSALLTE TLTGFVAKGS NISMLHRKLQ IL
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