| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1081 |
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| Symbol | rfbB-1 |
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| ID | 1182716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1185470 |
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| End bp | 1186543 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392459 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | NP_790915 |
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| Protein GI | 28868296 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.780125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATCT TAGTAACAGG CGGTGCTGGT TTCATCGGTT CGGCAGTCAT TCGGCACATC
ATTGCCAATA CAACTGACTC GGTCGTCAAC GTCGACAAGC TGACCTATGC AGGCAACCTT
GAATCACTTC AGTCAGCAGA TCAAAGCGAG CGTTATGCTT TCGAGCACGT CGACATCTGC
AACCGTGAAG ACCTGGATCG GGTTTTCAAA GAGCATCAGC CGGACGCCGT TATGCACCTG
GCAGCCGAAT CCCACGTGGA TCGCTCCATC ACCGGCCCGT CGGAATTCAT CCAGACCAAC
ATCATCGGCA CCTATGTGCT GCTTGAAGCT GCACGTAGCT ACTGGAACAC GCTGGACGAA
GTGCGCAAAG CCAACTTTCG CTTCCATCAC ATTTCGACCG ATGAAGTGTA TGGCGATCTG
GAAGGCCCGG AAGACCTCTT TACCGAAACA ACCCCTTACC AGCCAAGCTC GCCCTACTCG
GCCAGCAAGG CCAGCTCCGA CCATCTGGTA CGCGCGTGGA GCCGCACATA CGGCCTGCCT
ACCCTGGTAA CCAATTGCTC CAACAACTAC GGCCCGTGCC ATTTCCCGGA GAAACTGATC
CCGCTGATCA TCCTCAATGC GCTGGAAGGC AAACCACTGC CTATCTACGG TAAAGGCGAT
CAGGTTCGTG ACTGGCTTTA TGTCGAAGAC CACGCCCGTG CACTGTACAA AGTCGTGACC
GAAGGCGAGA TCGGCGAGAC TTACAACATC GGCGGTCACA ACGAGAAGCA GAACCTCGAA
GTGGTCAACA CTGTTTGCGC CCTGCTCGAC CAACTGCGCC CTGATTCGGC CCATCGCCCG
CATGCCAACC TGATCACATA CGTTCAGGAC CGCCCAGGCC ACGACCTGCG CTACGCGATC
GATGCCAGCA AAATCCAGCG CGAGCTGGGC TGGGTGCCTG AGGAAAGTTT CGAGTCCGGC
ATTCGCAAGA CAGTGCAGTG GTACCTCGAT AATCCTGAAT GGGTTGCTCA CGTGAAGAGC
GGAAGCTACC AGCAGTGGAT TGACAAGAAC TACACAGCAC GCGCCGATAA ATAA
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| Protein sequence | MKILVTGGAG FIGSAVIRHI IANTTDSVVN VDKLTYAGNL ESLQSADQSE RYAFEHVDIC
NREDLDRVFK EHQPDAVMHL AAESHVDRSI TGPSEFIQTN IIGTYVLLEA ARSYWNTLDE
VRKANFRFHH ISTDEVYGDL EGPEDLFTET TPYQPSSPYS ASKASSDHLV RAWSRTYGLP
TLVTNCSNNY GPCHFPEKLI PLIILNALEG KPLPIYGKGD QVRDWLYVED HARALYKVVT
EGEIGETYNI GGHNEKQNLE VVNTVCALLD QLRPDSAHRP HANLITYVQD RPGHDLRYAI
DASKIQRELG WVPEESFESG IRKTVQWYLD NPEWVAHVKS GSYQQWIDKN YTARADK
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