| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1076 |
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| Symbol | |
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| ID | 1182711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1180664 |
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| End bp | 1181491 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392454 |
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| Product | O-antigen ABC transporter, permease protein, putative |
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| Protein accession | NP_790910 |
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| Protein GI | 28868291 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.552725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTC ACAGAACCCC CTCGGCGGGG CCTATTCGCC TGGTTGCCAG CCTTTGGACC
AACCGGTCAT TGATCTCGCA AATGACCAAA CGGGAAGTCA TCGGCCGTTA TCGTGGCTCG
GTGATGGGCC TGGCCTGGTC ATTCTTCAAC CCGGTCCTGA TGCTGGCGGT TTATACCTTC
GTCTTTTCCG AGATTTTCAG CGCACGCTGG GTCGGCGTGG ACACCGGCAA AGGCGGGTTC
GCGATTCTGC TGTTCGTCGG AATGATCGTG CATGGCCTGT TTGCAGAGTG CGCCAACAGG
GCGCCATCGC TGGTGATGAG CAACAGCAAC TACGTCAAGA AAGTGGTTTT TCCGCTGGAG
ATCCTCCCGG TCATCACCTT GGGCTCGGCG CTGTTCCACA GCTGCATCAG CCTGGTCGTG
CTGGTAATTG CACAATTGCT GATCACACAC ACACTGTTCT GGACTGCGCT GCTGTTCCCG
CTGATTCTGG TGCCGCTCAT TTTAGGCACA CTCGGTATCA GCTGGTTTCT CGCATCGCTG
GGTGTGTACT TGCGCGATGT CGGCCACGTG ATCACCGTGC TGACAACCGT TCTGCTGTTC
CTCTCGCCGG TTCTTTACCC CGTGGCCGCA CTTCCAGAAG TGTACCGCCC GTGGCTGCAG
ATGAATCCGC TGACCTACAT TATCGAAGAG AGCCGCAGCG TACTGCTGTT CGGCAACCTC
CCCCACTGGG ACAGTCTGGG TATCGCCATT GCCATTGGCG CGGTGATTGC GGCCATGGGG
TTCTGGTTCT TCCAAAAGAC ACGTAAAGGA TTCGCTGATG TCATCTGA
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| Protein sequence | MNPHRTPSAG PIRLVASLWT NRSLISQMTK REVIGRYRGS VMGLAWSFFN PVLMLAVYTF
VFSEIFSARW VGVDTGKGGF AILLFVGMIV HGLFAECANR APSLVMSNSN YVKKVVFPLE
ILPVITLGSA LFHSCISLVV LVIAQLLITH TLFWTALLFP LILVPLILGT LGISWFLASL
GVYLRDVGHV ITVLTTVLLF LSPVLYPVAA LPEVYRPWLQ MNPLTYIIEE SRSVLLFGNL
PHWDSLGIAI AIGAVIAAMG FWFFQKTRKG FADVI
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