| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1072 |
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| Symbol | |
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| ID | 1182707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1171573 |
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| End bp | 1172688 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392450 |
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| Product | aminotransferase, DegT/DnrJ/EryC1/StrS family |
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| Protein accession | NP_790906 |
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| Protein GI | 28868287 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCC CAATGGAAAA TATTCCGCTT TTCTCGGCCA TCAAAGCTAA CGCTGGACTT
GATTTCGCAA CGCCGCTGAA GGCCGTGCTG AACAGCCACT GGTACGTTTT AGGTAACGAA
GTAAAGCTGT TTGAAGAAGA GTTTGCTGCC TATGTAGGCG TACAACATTG CATCAGCGTG
GCGAACGGTT CCGACGCACT GGAACTTGCC CTTAAAGGTC TGGGCATTGT GGTGGGTGAT
CGTGTGGTCG CCGTGGCAAA CGCAGGTTTC TACGGCAGCA CTGCTATTCA CGCGGTGGGC
GCGACTCCTG TGTATGCGGA TGTCGACCCA GCAACGTTGA CCCTGTGCAA AAACTCTCTG
GAAGCAGTGA TTGCCAAGGA AAAGCCGGCA GCCATCATTG TTACGCACCT GTACGGCCAA
CTGGCTAACA TCGAAGAGAT CGTTAAGATC GCTTCCGCCG CTGGCATTCC GGTTCTTGAA
GATTGCGCGC AATCCCACGG TGCTCGACGC AACGGCAAGC AAGCAGGCAG CTTTGGCACC
ATCGCTTGCT TTAGCTTCTA CCCGACTAAA AACCTGGGTG CTCTCGGTGA CGGCGGCGCA
GTGGTTACCG GTGATGACGC TCTGGCAGCA CGCATTCGGC AGCTTCGCCA GTACGGCTGG
GACCAGAAGT ACCGCATTGC CATCCCGGGC GGTCGTAACA GCCGGCTCGA CGAGATGCAA
GCCGCAATCC TGCGCATCAA GTTGCCGCAT CTGGACACCT GGAACGAGCA GCGTCGCTCG
ATCGCCAAAC GCTACAATGA AGTGTTTGCC GGGCTGGATA TCCAACTGCC TTCCTCGGTG
TCGGACGACT ACGTTGCACA CCTGTATGTG ATTCGCGTTA AAGATCGGGC AGCTCTGGCT
GCTGCGCTCA AAGAGAAGTC AGTCAGCACT GATATCCATT ACCCGATTGC CGACCACAAA
CAGCCAGCCT ATGCAGCCGC GCCGTCCGTG GCTCTGGACG TTACCGAGCG TACATGCGAT
ACCGTCATCT CCCTGCCCTG CTTCCCTGGC TTGAGCGACG ACGAAGTTGA TCGTGTCATC
GAGGCCGTGA CCGCGCATTT TTCCAAGGAG ATATGA
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| Protein sequence | MEIPMENIPL FSAIKANAGL DFATPLKAVL NSHWYVLGNE VKLFEEEFAA YVGVQHCISV
ANGSDALELA LKGLGIVVGD RVVAVANAGF YGSTAIHAVG ATPVYADVDP ATLTLCKNSL
EAVIAKEKPA AIIVTHLYGQ LANIEEIVKI ASAAGIPVLE DCAQSHGARR NGKQAGSFGT
IACFSFYPTK NLGALGDGGA VVTGDDALAA RIRQLRQYGW DQKYRIAIPG GRNSRLDEMQ
AAILRIKLPH LDTWNEQRRS IAKRYNEVFA GLDIQLPSSV SDDYVAHLYV IRVKDRAALA
AALKEKSVST DIHYPIADHK QPAYAAAPSV ALDVTERTCD TVISLPCFPG LSDDEVDRVI
EAVTAHFSKE I
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