| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1070 |
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| Symbol | |
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| ID | 1182705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1169689 |
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| End bp | 1170639 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392448 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | NP_790904 |
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| Protein GI | 28868285 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.710053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCG GTAAGGATTT TTTCGTTCAC AGCCACGCCC TGTGCGAGTC AGAGAATATC
GGTAAGGATT CGCGAGTATG GGCGTTCGCT CATATCTTGC CTGGCGCCCG TCTGGGTAGC
GAATGCAACG TCTGCGACAA CGTATTCATC GAGAACGACG TTATCATTGG CGATCGAGTG
ACACTGAAGT GCGGCGTACA GGTCTGGGAT GGCATTACCA TTGAGGACGA TGTATTCATC
GGCCCCAACG CCACCTTTAC CAATGACCTG TTCCCGCGCA GCAAGGTCTA TCCGCAAACC
TTTGCTCGCA CCATCATCCG AAAAGGCGCA TCTCTGGGCG CCAACTGCAC GATCCTGCCG
GGTATTACAA TCGGGATCAA CGCAATGGTG GGTGCAGGGG CTGTGGTGAC ACGCTCAGTG
CCGCCTAACG CGATAGTTGT CGGCAACCCG GCCAAGATCA TTGGTTATGT GGACGCCAAG
CCTGTCAACG CCAACAGTGA AACGCGAGCA GAACAGAAAG CGCCTGGCGT AACCGCTACC
TCCGTCAAGA ACGTTACGCT GCACACCATG AATGAAGTGG CTGACATTCG CGGCAGTTTG
TCGGCGGGCG AATTCGAGCG CTCAGTGCCC TTCAAGACCG AACGTTACTT CCTTGTTTAT
GACGTTCCGA CTGCCGAAAC CCGAGGCGAG CATGCTCACC GCATCTGTCA CCAGTTTCTG
GTAGCGGTAA AGGGCTCGGT TCACGTTGTA GCAGACGACG GCGTTAATCG TGAAGAGTTT
ATTCTCGACA AACCGAATCA GGGCATACAT TTGCCTCCAA TGACTTGGGG TATTCAGTAT
CGCTACTCTC AGGATGCCGT GCTGCTGGTG TTCGCTTCGC ACTACTATGA TGCCGGGGAC
TACATTCGTA ATTACGAAGA GTTTAAGTCC CTGATCGCGA ACGCTGAATA A
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| Protein sequence | MSSGKDFFVH SHALCESENI GKDSRVWAFA HILPGARLGS ECNVCDNVFI ENDVIIGDRV
TLKCGVQVWD GITIEDDVFI GPNATFTNDL FPRSKVYPQT FARTIIRKGA SLGANCTILP
GITIGINAMV GAGAVVTRSV PPNAIVVGNP AKIIGYVDAK PVNANSETRA EQKAPGVTAT
SVKNVTLHTM NEVADIRGSL SAGEFERSVP FKTERYFLVY DVPTAETRGE HAHRICHQFL
VAVKGSVHVV ADDGVNREEF ILDKPNQGIH LPPMTWGIQY RYSQDAVLLV FASHYYDAGD
YIRNYEEFKS LIANAE
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