| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1050 |
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| Symbol | |
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| ID | 1182684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1147569 |
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| End bp | 1148096 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392429 |
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| Product | TRAP dicarboxylate transporter, DctQ subunit, putative |
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| Protein accession | NP_790886 |
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| Protein GI | 28868267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.188481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA CGCTTTTGCG CATCAACGAC ACGCTCTATC GGGCCTGCAT CGGTATCGCC
GGTCTGTCGG TGCTGATCAT GACCCTGATC ATCCCCTGGG GCATCTTCGC CCGCTACATC
CTGGGCAGCG GCTCCAGTTG GCCGGAACCT ACCGCCATTC TGCTGATGGT GGTGTTTACC
TTCTTCGGTG CCGCCGCCAG CTACCGCGCC GGGGCGCACA TGGCCGTTTC GATGGCGGTA
GACCGCATGC CGCAGCAGGT ACGCCGCATC GCCTCTGTGC TGGTGCAGAT CCTGATGGCG
ACAGTGGCCC TGTTCATGAT CTTCAAGGGC TTCAAGCTGT GCGCCACCAC CTGGAATCAG
TTTGTCGGCG AACTGCCCTT TCTGCGCGTC GGGATCTCTT ACCTGCCGAT CCCCATCGGC
GGCATCGTGA CCCTGGTTTT CGTGCTGGAA AGACTGTTTC TGGGCGACCA GAGTCATCGC
GCAGTGATGC GCTTCGACGT TATTGAAGAA AGCGAAGGTG CCGCATAA
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| Protein sequence | MKNTLLRIND TLYRACIGIA GLSVLIMTLI IPWGIFARYI LGSGSSWPEP TAILLMVVFT
FFGAAASYRA GAHMAVSMAV DRMPQQVRRI ASVLVQILMA TVALFMIFKG FKLCATTWNQ
FVGELPFLRV GISYLPIPIG GIVTLVFVLE RLFLGDQSHR AVMRFDVIEE SEGAA
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