Gene PSPTO_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1041 
SymbolaroA 
ID1182675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1140091 
End bp1141347 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID637392420 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionNP_790877 
Protein GI28868258 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCTC AAGCCACTCT CACTGTTATG CCTGTCGAGC GCCCGCTGGT CGGGCGCGTC 
AGCCCGCCGG GCTCCAAGTC GATCACCAAC CGCGCACTGC TGCTGGCGGG GCTTGCCAAA
GGCACCAGCC GCCTGACCGG CGCGCTGAAG AGTGACGATA CCCGTGTGAT GTCCGAAGCA
CTGCGACTGA TGGGCGTGCA GGTCGACGAG CCGGATGACA GCACCTTTGT GGTCACCAGC
AGCGGCCACT GGCAAGCGCC GCAGCAAGCG CTGTTTCTCG GCAACGCCGG GACCGCGACG
CGCTTTCTGA CCGCTGCGCT GGCCAACTTT GAAGGCGACT TCGTGGTGGA TGGCGACGAG
TACATGCGTA AACGCCCGAT CGGCCCGCTG GTCGATGCCT TGCAGCGCAT GGGCGTGGAA
ATCAGCGCGC CCAGCGGTTG CCCGCCCGTG GCGATCAAGG GCAAGGGCGG TCTGCAAGCC
GGGCGTATTG AAATCGACGG CAACCTGTCC AGCCAGTACG TATCGGCGCT GCTGATGGCC
GGAGCGTGTG GCAAAGGCTC GCTTGAAGTT GCTCTGACCG GTAGCGAGAT CGGCGCACGC
GGCTATGTCG ACCTGACCCT GGCGGCGATG CAGGCCTTCG GCGCTGAAGT TCAGGCCATC
GGCGACGCTG CCTGGAAAGT CTCGGCCACC GGCTACCACG CTACGGATTT CCACATCGAG
CCGGATGCAT CGGCAGCCAC CTACCTCTGG GCCGCACAAG CCCTGACCGA AGGCAACATC
GACCTGGGCG TGGCCAGTGA TGCATTCACT CAGCCTGACG CGCTGGCCAG CCAGATCATC
GACAGCTTCC CGAACATGCC GGCGGTGATC GACGGTTCGC AAATGCAGGA CGCCATTCCG
ACCCTCGCAG TGCTCGCGGC CTTCAATCGT CAGCCGGTAC GCTTCGTCGG CATCGCCAAC
CTGCGGGTCA AGGAATGTGA TCGTATTTCA GCGCTGTGTG ACGGCCTGTG CGCCATCGCA
CCGGGCCTTG CGGTTGAAGA GGGCGACGAC CTGATCGTGC ACGCCAACCC GGCGCTGGCA
GGGACCACAG TCAACGCACT GATCGACACC CATTCCGACC ATCGCATCGC CATGTGCTTT
GCCCTGGCTG GTTTGAAGAT CAAAGGCATC CATATTCAGG ATCCCGATTG CGTCGCCAAG
ACCTATCCGG GTTACTGGGA TGCGCTGGCT TCGCTGGGGG TGAGTGTTCA GCGCTGA
 
Protein sequence
MRPQATLTVM PVERPLVGRV SPPGSKSITN RALLLAGLAK GTSRLTGALK SDDTRVMSEA 
LRLMGVQVDE PDDSTFVVTS SGHWQAPQQA LFLGNAGTAT RFLTAALANF EGDFVVDGDE
YMRKRPIGPL VDALQRMGVE ISAPSGCPPV AIKGKGGLQA GRIEIDGNLS SQYVSALLMA
GACGKGSLEV ALTGSEIGAR GYVDLTLAAM QAFGAEVQAI GDAAWKVSAT GYHATDFHIE
PDASAATYLW AAQALTEGNI DLGVASDAFT QPDALASQII DSFPNMPAVI DGSQMQDAIP
TLAVLAAFNR QPVRFVGIAN LRVKECDRIS ALCDGLCAIA PGLAVEEGDD LIVHANPALA
GTTVNALIDT HSDHRIAMCF ALAGLKIKGI HIQDPDCVAK TYPGYWDALA SLGVSVQR