Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1041 |
Symbol | aroA |
ID | 1182675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1140091 |
End bp | 1141347 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637392420 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | NP_790877 |
Protein GI | 28868258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACCTC AAGCCACTCT CACTGTTATG CCTGTCGAGC GCCCGCTGGT CGGGCGCGTC AGCCCGCCGG GCTCCAAGTC GATCACCAAC CGCGCACTGC TGCTGGCGGG GCTTGCCAAA GGCACCAGCC GCCTGACCGG CGCGCTGAAG AGTGACGATA CCCGTGTGAT GTCCGAAGCA CTGCGACTGA TGGGCGTGCA GGTCGACGAG CCGGATGACA GCACCTTTGT GGTCACCAGC AGCGGCCACT GGCAAGCGCC GCAGCAAGCG CTGTTTCTCG GCAACGCCGG GACCGCGACG CGCTTTCTGA CCGCTGCGCT GGCCAACTTT GAAGGCGACT TCGTGGTGGA TGGCGACGAG TACATGCGTA AACGCCCGAT CGGCCCGCTG GTCGATGCCT TGCAGCGCAT GGGCGTGGAA ATCAGCGCGC CCAGCGGTTG CCCGCCCGTG GCGATCAAGG GCAAGGGCGG TCTGCAAGCC GGGCGTATTG AAATCGACGG CAACCTGTCC AGCCAGTACG TATCGGCGCT GCTGATGGCC GGAGCGTGTG GCAAAGGCTC GCTTGAAGTT GCTCTGACCG GTAGCGAGAT CGGCGCACGC GGCTATGTCG ACCTGACCCT GGCGGCGATG CAGGCCTTCG GCGCTGAAGT TCAGGCCATC GGCGACGCTG CCTGGAAAGT CTCGGCCACC GGCTACCACG CTACGGATTT CCACATCGAG CCGGATGCAT CGGCAGCCAC CTACCTCTGG GCCGCACAAG CCCTGACCGA AGGCAACATC GACCTGGGCG TGGCCAGTGA TGCATTCACT CAGCCTGACG CGCTGGCCAG CCAGATCATC GACAGCTTCC CGAACATGCC GGCGGTGATC GACGGTTCGC AAATGCAGGA CGCCATTCCG ACCCTCGCAG TGCTCGCGGC CTTCAATCGT CAGCCGGTAC GCTTCGTCGG CATCGCCAAC CTGCGGGTCA AGGAATGTGA TCGTATTTCA GCGCTGTGTG ACGGCCTGTG CGCCATCGCA CCGGGCCTTG CGGTTGAAGA GGGCGACGAC CTGATCGTGC ACGCCAACCC GGCGCTGGCA GGGACCACAG TCAACGCACT GATCGACACC CATTCCGACC ATCGCATCGC CATGTGCTTT GCCCTGGCTG GTTTGAAGAT CAAAGGCATC CATATTCAGG ATCCCGATTG CGTCGCCAAG ACCTATCCGG GTTACTGGGA TGCGCTGGCT TCGCTGGGGG TGAGTGTTCA GCGCTGA
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Protein sequence | MRPQATLTVM PVERPLVGRV SPPGSKSITN RALLLAGLAK GTSRLTGALK SDDTRVMSEA LRLMGVQVDE PDDSTFVVTS SGHWQAPQQA LFLGNAGTAT RFLTAALANF EGDFVVDGDE YMRKRPIGPL VDALQRMGVE ISAPSGCPPV AIKGKGGLQA GRIEIDGNLS SQYVSALLMA GACGKGSLEV ALTGSEIGAR GYVDLTLAAM QAFGAEVQAI GDAAWKVSAT GYHATDFHIE PDASAATYLW AAQALTEGNI DLGVASDAFT QPDALASQII DSFPNMPAVI DGSQMQDAIP TLAVLAAFNR QPVRFVGIAN LRVKECDRIS ALCDGLCAIA PGLAVEEGDD LIVHANPALA GTTVNALIDT HSDHRIAMCF ALAGLKIKGI HIQDPDCVAK TYPGYWDALA SLGVSVQR
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