| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1039 |
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| Symbol | |
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| ID | 1182673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1138505 |
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| End bp | 1139509 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392418 |
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| Product | response regulator |
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| Protein accession | NP_790875 |
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| Protein GI | 28868256 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGC TTGCACTGTT GATATGCGAT GACTCAAACA TGGCGCGCAA GCAGCTGCTG
CGTGCGCTGC CTGCCGATTG GGATGTGGCG GTCACGCTGG CCACCCAGGG CGAGGAAGGT
CTGGAAGCCA TTCGTAAGGG GCAGGGCCAG GTCGTCCTGC TCGACCTGAC CATGCCGGTG
ATGGACGGCT ACCAGACGCT GGCAGCGATT CGTGCCGAAA ATCTGGACGC CAAAGTCATC
GTGGTGTCAG GCGACGTGCA GGACGAAGCC GTGCGTCGGG TCATGGAACT CGGCGCGCTG
GCGTTTCTGA AAAAGCCTGC CGACCCGGAC GAACTGAAAA GCACACTGGA ACGCCTCGGC
CTGCTGGGCA AACCGCCGGC TATTCCCGTT GCGCTGCCGG CCCTGAACAG CGCGGGCGGG
GTGATCAGCT TTCAGGATGC CTTCCGCGAA ACCATCAACG TTGCGATGGG CCGCGCCGCG
GCGCTGCTGG CCAAGGTGCT GGGTGTGTTC GTGCAGTTGC CGGTGCCCAA CGTCAACATG
CTGGAAGTCG GCGAATTGCA CATGGCGCTG GCCGATGCCC ACGCGGATCA GCACCTGACG
GCGGTGTGTC AGGGCTACAT CGGTGGCGGT ATTGCCGGCG AAGCGCTGCT GATCTTCCAC
GACTCGGAAA TCTCCGGCGT ATCGAAGTTG ATGGGCGACG ATAATTCCGA CAGCTCGAAC
ATGGAGATGC TGCTGGACCT TTCCACCATC CTCATCGGTG CCTGCCTGAG CGGAATTGCC
GAGCAGATCG ACATCGCGTT CTCACAAGGC CACCCTCAGT TGCTGGGTGC GCAGGGCGGC
ATCGACGAGT TGATTCGTAT CAATCAGCAG CGCTGGAAAA AGACCCTGGC GGTCGAAATC
AGTTACAGCG TGGAAGGCCA CAACATTCAC TTCGATCTGC TGATGCTGTT TACCGAAGAT
TCGGTCGACC TGCTCAGCAA AAAACTCGCC TACATGATGA GCTGA
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| Protein sequence | MSTLALLICD DSNMARKQLL RALPADWDVA VTLATQGEEG LEAIRKGQGQ VVLLDLTMPV
MDGYQTLAAI RAENLDAKVI VVSGDVQDEA VRRVMELGAL AFLKKPADPD ELKSTLERLG
LLGKPPAIPV ALPALNSAGG VISFQDAFRE TINVAMGRAA ALLAKVLGVF VQLPVPNVNM
LEVGELHMAL ADAHADQHLT AVCQGYIGGG IAGEALLIFH DSEISGVSKL MGDDNSDSSN
MEMLLDLSTI LIGACLSGIA EQIDIAFSQG HPQLLGAQGG IDELIRINQQ RWKKTLAVEI
SYSVEGHNIH FDLLMLFTED SVDLLSKKLA YMMS
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