Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1037 |
Symbol | |
ID | 1182671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1137307 |
End bp | 1137768 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392416 |
Product | hypothetical protein |
Protein accession | NP_790873 |
Protein GI | 28868254 |
COG category | [S] Function unknown |
COG ID | [COG5654] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGCAG TGTATCGCCT GGTCAAACGC AAATGGCTGG CTCAGGCGTT CGACGGCGAA GGCGCAAAGC TCTATGGCGG GCGCTGGAAC AGCAAGGGCA ATGCCTGCGT GTATTGCGCG GGCAGCGAGT CACTGGCGTT GCTGGAAATA CTGGTTCACC TGAACAACAG CGGCGTGGCC CGGCATTACG CCATGCTGGA ACTGCAGATA GCCGAAGCAC ATATCCTCAA CGCCCGCCCC GACACCCTGC CCCCCGACTG GCGCGAAGAA CCCGCGCCAC AAGCCACCGC CTCATTCGGC GACGCCTGGC TGGCCTCCGG TCAAAGCCTG GCGCTGGCCG TGCCCAGCGT GATCATCCCG CGCGAGTCCA ACTACCTGCT CAACGTCCGG CACCCGGAAT TTCAGGCTGT TGTGGCAACA GTCAAGGAGC TGGAATTTGT GGTTGATTCG CGTTTGAAAT GA
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Protein sequence | MIAVYRLVKR KWLAQAFDGE GAKLYGGRWN SKGNACVYCA GSESLALLEI LVHLNNSGVA RHYAMLELQI AEAHILNARP DTLPPDWREE PAPQATASFG DAWLASGQSL ALAVPSVIIP RESNYLLNVR HPEFQAVVAT VKELEFVVDS RLK
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