Gene PSPTO_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1037 
Symbol 
ID1182671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1137307 
End bp1137768 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID637392416 
Producthypothetical protein 
Protein accessionNP_790873 
Protein GI28868254 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCAG TGTATCGCCT GGTCAAACGC AAATGGCTGG CTCAGGCGTT CGACGGCGAA 
GGCGCAAAGC TCTATGGCGG GCGCTGGAAC AGCAAGGGCA ATGCCTGCGT GTATTGCGCG
GGCAGCGAGT CACTGGCGTT GCTGGAAATA CTGGTTCACC TGAACAACAG CGGCGTGGCC
CGGCATTACG CCATGCTGGA ACTGCAGATA GCCGAAGCAC ATATCCTCAA CGCCCGCCCC
GACACCCTGC CCCCCGACTG GCGCGAAGAA CCCGCGCCAC AAGCCACCGC CTCATTCGGC
GACGCCTGGC TGGCCTCCGG TCAAAGCCTG GCGCTGGCCG TGCCCAGCGT GATCATCCCG
CGCGAGTCCA ACTACCTGCT CAACGTCCGG CACCCGGAAT TTCAGGCTGT TGTGGCAACA
GTCAAGGAGC TGGAATTTGT GGTTGATTCG CGTTTGAAAT GA
 
Protein sequence
MIAVYRLVKR KWLAQAFDGE GAKLYGGRWN SKGNACVYCA GSESLALLEI LVHLNNSGVA 
RHYAMLELQI AEAHILNARP DTLPPDWREE PAPQATASFG DAWLASGQSL ALAVPSVIIP
RESNYLLNVR HPEFQAVVAT VKELEFVVDS RLK