Gene PSPTO_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1036 
Symbol 
ID1182670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1136613 
End bp1137074 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID637392415 
Producthypothetical protein 
Protein accessionNP_790872 
Protein GI28868253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAA ACGTTGTCAC TCTGCCACCC ACCATCGTCA CGCCTGATCA ACCGTTGCCC 
AGGCCACTAG GACCATTACC GGGGGCCGGA GTAGTTGCCA GGCCGCTACG GTGGGACGGC
ACCATTCCTG CAAACCATGA AATCGATGCA TTCTTTAGTA AAAGGGGAAT AAGAAACGAG
CATTACAGGA TGTCTGTGAT TATGACAGCA TTTTCGACAC AGCAAAGTAT CGATCAGTCT
TACATAGAAT CTTTGCCCTT TCTTCCCGCT GACGTTGACG CGGAAATTTC CGCTGCCGTA
GGGCACTATA ATCTTCCTGA ATTAGAAACG GCCAAGTTTG AAAAAAACGT TGTGGACAGC
CTGATATCAC AAAGTGCTGC TGAGTTGGCA AAAAGCAACG AACGTGCTCA TGCTTTCTTT
GGCAGGCATG TATTAGCGGT AGAAATTAAA AAAGTTCTGT AG
 
Protein sequence
MPQNVVTLPP TIVTPDQPLP RPLGPLPGAG VVARPLRWDG TIPANHEIDA FFSKRGIRNE 
HYRMSVIMTA FSTQQSIDQS YIESLPFLPA DVDAEISAAV GHYNLPELET AKFEKNVVDS
LISQSAAELA KSNERAHAFF GRHVLAVEIK KVL